| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0886 |
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| Symbol | |
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| ID | 6743698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 833843 |
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| End bp | 834685 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642750692 |
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| Product | spermidine synthase |
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| Protein accession | YP_002121551 |
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| Protein GI | 195953261 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATG TATATTTTAT GGAGAGAGAC CCTTATGCAC CTATAAGACA TTGTTATGGC
ATAAGCAAAA TCCTTTACGA AGGCAAGTCA AAATATCAAG AGATTCAAGT AGTAGAGTCC
CATTACTTTG GTAAAATATT GATACTTGAT GGTGTAGTGC AATTTACAGA AAAAAACGAA
TTTTTCTATC ACGAAATGCT AACTCATCCT GTAATGTTTG CTCATAAAAA TCCCCAAAAT
GTGCTAATAA TAGGTGGAGG AGACGGTGGC ATCCTAAGAG AGGTTTTAAA ACACAAGTCT
GTAAAGAAAG CTGTATTGGT GGATATAGAT AAAGATGTAG TAGAAGTGTC TAAAAAGTTT
TTCCCCACCG TCGCTTGTTC GATGGATGAT CCTAGAGCTA TCATACTAAA TGAAGATGGT
TTTAAATACA TTCAAGACTA TAAAAATGAG TTTGATGTTA TCATAGTAGA CTCTACAGAT
CCTGTTGGTT TCGCACATGT ACTTACCACA GAAGAGTTCT TTAAATATGT GTTTGAAGCT
TTAAAAGAAG ATGGTATATA CGTTGGACAA TCTGAATCTT TGCACTATCA TCTTGATATA
GTTGTGCGTT TTCAAAAAGC TTTGAAAAAA AGCTTTCCTA TAGTAGACCT TTACACCACC
GTTATACCAG TATACGCTGG GTATTGGTGG AGTTTTTCAG TGGGTTCCAA AGTTTACAAT
CCACGAGAAA TATCAAGAGA AGTTGATGTA GAAACGAGAT TTTACTCAGA TGAAATACAC
AAAAACGCAT TTTTGCCACC AAACTTTTAT CAAAAGATTT TAAACGGTAA TTTTAAATAT
TGA
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| Protein sequence | MKDVYFMERD PYAPIRHCYG ISKILYEGKS KYQEIQVVES HYFGKILILD GVVQFTEKNE
FFYHEMLTHP VMFAHKNPQN VLIIGGGDGG ILREVLKHKS VKKAVLVDID KDVVEVSKKF
FPTVACSMDD PRAIILNEDG FKYIQDYKNE FDVIIVDSTD PVGFAHVLTT EEFFKYVFEA
LKEDGIYVGQ SESLHYHLDI VVRFQKALKK SFPIVDLYTT VIPVYAGYWW SFSVGSKVYN
PREISREVDV ETRFYSDEIH KNAFLPPNFY QKILNGNFKY
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