Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0860 |
Symbol | groEL |
ID | 6743671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | + |
Start bp | 809435 |
End bp | 811066 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 642750666 |
Product | chaperonin GroEL |
Protein accession | YP_002121525 |
Protein GI | 195953235 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000123725 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCAA AACATGTTAT CTATGGAGAA GAAGCAAGGG CAAAATTAAA AGCAGGCGTT GACAAGTTGG CTAATGCCGT TAAAGTCACC CTTGGACCAA AGGGTAGAGA AGTCATCATA GAAAAGAAAT GGGGGGTACC AGTAGTTACA AAAGATGGTG TTACTGTAGC TAAAGAAATA GAACTAAAAG ACCAATTTGA AAACATAGGA GCCCAACTTG TAAAAGAAGT AGCTTCAAAA ACTGCTGATG TAGCAGGTGA TGGTACCACT ACAGCTACAG TTTTAGCTCA AGCTATATTC ACAGAAGGCC TAAAAGCAAT AGCTTCTGGT GCAAATCCAA TGGATTTAAA AAGAGGTATA GACGAAGCTG TAGCACTTGT CATAGAAGAA GTCAAGAAAG CCTCTATACC TGTTACCAGC AATAAAGAAA TAGAACAAGT AGCCACAATA TCCGCTAACA ACGATCCTGT AATAGGAAAA TTGTTGGCTG AAGCTATGGA AAAGGTAGGA AAAGATGGTG TAATAACTGT AGAAGAATCA AAATCCTCTG AAACCACACT TGAAACAGTA CAAGGTATGC AATTTGATAG GGGATATCTC TCACCATACT TTATAACCGA TGCAGATAAA ATGCAAGCAG TATTGGAAAA CCCATACATA CTAATATTTG AGAAAAAGAT AAGCAACATA AAAGAACTTC TACCTGTATT AGAAAACGTA GTAAGAGTCG GTAGATCTTT AGTAATAATA GCTGAAGACG TAGAGGCTGA AGCACTTGCT ACTTTAGTAG TAAACACTCT AAAAGGAGTA ATAAGGGCGG TAGCTGTAAA AGCACCTGGA TTTGGTCAAA GGAGAAAAGA CTACTTAGAA GATATAGCTA TATTAACTGG TGGTCAAGCT ATCACTGAAG ATCTCGGTAT AAAGTTAGAA TCTGTAACTC TTGATATGCT TGGACAAGCC GAAAAAGTGA TAGTGGATAA GGAAAATACC ACTATAGTAG GTGGAAAGGG CGACAAGAAA AAAGTAGAAG CACGTATAGA GCAAATAAAG AAGCAAATAA AAGAAACCAC CTCAGACTAC GATAGGGAAA AGCTTCAAGA AAGACTTGCT AAGCTTTCTG GTGGCGTAGC AATTATAAGA GTTGGAGCGG CTACAGAGTC TGAGCTAAAA GAAAAGAAGG CTAGAGTAGA AGATGCGGTA CATGCCACAA AAGCTGCTGC TGAAGAAGGT ATAGTAGCTG GTGGTGGTAC AGCTTTAGCA AAAGCTTCAA GAGTATTAGA AAACTATACA AGCGCCAACA AAGACAGAGA GCTTGGAGTG AAAATTGTGT ACAACGCCTG CAAGTATCCT CTAAAACAAA TAGCTTATAA CGCCGGTTAC GAGGGTTCTT TGGTGCTTGA AAAAGTATAT GAAGATCAAG ACAAGAACTA TGGTTTTGAC GCCGCCAACG GAGAGTACAA AGATATGGTA AAAGCAGGTA TAATAGATCC AACCAAAGTG GTAAGAACCG CTTTACAAAA TGCAGCATCT GCAGCCGGAA CAATGCTAAC CGCTGAAGCT CTTATAGCAG AACTCCCTGA AAAGAAGGAA AAGACACCAA CCCCAACAGA TATGCCACCA GATTTTGATT AA
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Protein sequence | MAAKHVIYGE EARAKLKAGV DKLANAVKVT LGPKGREVII EKKWGVPVVT KDGVTVAKEI ELKDQFENIG AQLVKEVASK TADVAGDGTT TATVLAQAIF TEGLKAIASG ANPMDLKRGI DEAVALVIEE VKKASIPVTS NKEIEQVATI SANNDPVIGK LLAEAMEKVG KDGVITVEES KSSETTLETV QGMQFDRGYL SPYFITDADK MQAVLENPYI LIFEKKISNI KELLPVLENV VRVGRSLVII AEDVEAEALA TLVVNTLKGV IRAVAVKAPG FGQRRKDYLE DIAILTGGQA ITEDLGIKLE SVTLDMLGQA EKVIVDKENT TIVGGKGDKK KVEARIEQIK KQIKETTSDY DREKLQERLA KLSGGVAIIR VGAATESELK EKKARVEDAV HATKAAAEEG IVAGGGTALA KASRVLENYT SANKDRELGV KIVYNACKYP LKQIAYNAGY EGSLVLEKVY EDQDKNYGFD AANGEYKDMV KAGIIDPTKV VRTALQNAAS AAGTMLTAEA LIAELPEKKE KTPTPTDMPP DFD
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