| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0852 |
|---|
| Symbol | |
|---|
| ID | 6743663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | - |
|---|
| Start bp | 802963 |
|---|
| End bp | 803790 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642750658 |
|---|
| Product | CinA domain protein |
|---|
| Protein accession | YP_002121517 |
|---|
| Protein GI | 195953227 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
|---|
| TIGRFAM ID | [TIGR00199] competence/damage-inducible protein CinA C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.168381 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTA TAAACGTTAT CTTTGAAGAT GTTGTTTGTT ACGATGATTA CCTTGAAAGG
CTTCAGAAAT ATTTATTTGA AAAGGGTTAT ATAATTTCTT CAAAAGCCAA AAACTATATA
ATTATAAACA AGGAAAACTA CAATCCGTTA GATTGGGATA AATTGTTACA TTTGGAAGTA
AGACAAAAAC CGCTGATACT TAGATTGTTT TACTTGGATA AAGATCTAGA ACAAATAAAG
GATTGTTATA TAAAACAAAC ACCTTTTGGA TTTGATGTTT TTCCAGAGGA AAGCGAAATG
TTTAGGCTTT TAAAAGAAAA ATACAAAGAT TATATATATA CAGATACTTA CGAAAGCATA
GAAGAAACGG TTATAAAAAC TTTGAAAGAC AAATCAAAAA CTCTTGTTTG TGCTGAAAGT
TGCACCGCTG GGATGATAAG CTCAAGCCTT GTGAATGTAG CTGGTTCATC TCCGGTATTC
TTAGGAGGCT TTGTAGTCTA CTCTAACGAT TTTAAAGTAA ATTTTTTAAA CGTTAACAGG
ACTCTGATAG AAAGATACGG GGCAGTTTCG GAAGAAGTGG TAAGGGCAAT GGCGCTTGGG
GCTCTTGAAT ACTCTGATGC TGATATATCA ATTGCAGTTA GTGGTATAGC GGGTCCTGGG
GGTAGCGAAT TTAAACCTCA AGGCTTTACT TATATGGCTA TAGGCACCGA CAAAGACATT
CTTGTATACA ACTATACATT TAAATCTGAT CGCAATACCA ACAGAAGACA AACAACGGCT
TTTGTATTGT TTAAGCTTTT AAAGGATGTT TTGAACTACA CCATCTAA
|
|---|
| Protein sequence | MNFINVIFED VVCYDDYLER LQKYLFEKGY IISSKAKNYI IINKENYNPL DWDKLLHLEV
RQKPLILRLF YLDKDLEQIK DCYIKQTPFG FDVFPEESEM FRLLKEKYKD YIYTDTYESI
EETVIKTLKD KSKTLVCAES CTAGMISSSL VNVAGSSPVF LGGFVVYSND FKVNFLNVNR
TLIERYGAVS EEVVRAMALG ALEYSDADIS IAVSGIAGPG GSEFKPQGFT YMAIGTDKDI
LVYNYTFKSD RNTNRRQTTA FVLFKLLKDV LNYTI
|
|---|
| |