Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0850 |
Symbol | |
ID | 6743661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | + |
Start bp | 800498 |
End bp | 801637 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642750656 |
Product | secretion protein HlyD family protein |
Protein accession | YP_002121515 |
Protein GI | 195953225 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000138704 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAGAA ATAAAAAGAT TGGTATAGCC GTATTGGTAA TACTTATTGT TATATTCTCA GTAGTTGCCT TTAAATGGAT ATACTACAGG ATCACACATG CGGTTTCCGA TGCAGTGTTT GTGGAAGCAA ACACCTTTAC AGATGTAGCT TACAGAAGAG ATAGTGGAAG AATTATAAAA CTATTCAAAA AAGAGGGAGA CAAAGTCCTA AAAGGCGAAC CTTTGGCAAA AATTGACGAT ACAGATTATA AATTAGAGTA TAAAGCTTTA AAGTATCAGA TTAAAGAGCT TGAGAGCGAA ATAAACCTTT ATAAAATCCA AAGGGATAGG CTTTTAGTAG GTACAGGACT GGAAGCTCAA GCTAATCTAT ATAGAACTAT GGAAGCTACT CAAAATATGC AATCTATTAT GAACAAAGTA AAAGCTTTAG ATGCAAAGAT ATCTTTAGTG AATAAAGACT ATCATAGATT TCACAAACTT TATAAAGACG GCGTTATATC AAGACATGCT TTTGAAGAAA AAGAGACAGA GCTTAAGAAC CTTCTAAACG AAAAAAACGC ACTGTTAAAT CAAGCTAACG CCATGGCTTC TTTATCAAAA GCTCAAAACT TAGGTGTAGC TATTGCAAAA AACAACCAAA AGCAGGTAAA AGAATTAACC CAAAAGATAG ATGCTACAGA AAACCAGATA AAATCTCTAG AAGCAAAACT TCAAAATGTA TCTGATATGA TAGTTGAGAC AGAACTCACC AGTCCTATAT CAGGGTATAT AGTAAAAAAG TTTGTAAGCG TGGGTGATGT AGTAAAACCA GGCCAACCAA TATACGCTGT GTATAATCCA AAATCTGTAT ATGTGCTTGA TATAATAGAC GAGACAAAAC TACACGGTAT AAAGAAAGGA TGTTTGGTAC ACATACACAT AGATGCCTTG CCAAACGAAC ATTATGAAGG TGTGGTATCT GAGATTTTAA GAGCATCCGC TGCTAAATTC GCACTCATAC CAAGAGACAT CACGGCAGGA GAGTTTACAA AGGTAGCTCA AAGAATACCG GTAAAAATCA AAATTACAAA GGGTAATATC AACCTTTTAA GGGTAGGATA TAGCGGTGAA GTGGCTATAG ATAGATGTGC CAATCATTGA
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Protein sequence | MDRNKKIGIA VLVILIVIFS VVAFKWIYYR ITHAVSDAVF VEANTFTDVA YRRDSGRIIK LFKKEGDKVL KGEPLAKIDD TDYKLEYKAL KYQIKELESE INLYKIQRDR LLVGTGLEAQ ANLYRTMEAT QNMQSIMNKV KALDAKISLV NKDYHRFHKL YKDGVISRHA FEEKETELKN LLNEKNALLN QANAMASLSK AQNLGVAIAK NNQKQVKELT QKIDATENQI KSLEAKLQNV SDMIVETELT SPISGYIVKK FVSVGDVVKP GQPIYAVYNP KSVYVLDIID ETKLHGIKKG CLVHIHIDAL PNEHYEGVVS EILRASAAKF ALIPRDITAG EFTKVAQRIP VKIKITKGNI NLLRVGYSGE VAIDRCANH
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