| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0819 |
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| Symbol | |
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| ID | 6743625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 760336 |
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| End bp | 762717 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642750620 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002121484 |
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| Protein GI | 195953194 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00766455 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAG AAGCTTTTAA GCATATAAAA CATTACTTAG AAAATATTAA CAAAAAATAT
GGTCTTGTAT TTTCTTGGTT AGGCTTAAGA AAAAGCGATT ATACGGTTTT CCCGCTAATG
TCGTCAAAAG AAAATGAAGA CTATTTAAAA TATGTAAAGT TAAGATGGGA TGATTCACCA
TATGGTAATG CACCTGTACC TGTGGGAATG GCAATAAAAA CGGCTAAGAT TCAATATTCA
AATGATATGC TAAATGACAA AAGATTTGAG CCAGTTTATG AGCTTTTAAA GAAGAAAAAT
TTTTTGTCAA TGATTACTGT TCCTTTGCTT AAAGACGATA ACAAAGTGTT TGGGGTTTTT
GCGGGTTATT CTGATAAAAT TAATTTTTTT AACGATGAAA TTATACATAG CATATCGAGG
GATGTTGAAA ATATAAATCA AGAGCTTGTT AAAATTTATA AAGATGAAAT TCAAATAGAG
GAAAAAATAA ATGAATACCT TAGTATTTTA TACGACATGA TAACATATAT AAACAAAGGC
ACTGCATCAA ATATAGACCC GAAATATTTA ACCGTAGATG TTTTAAACGA TTTAGATAAG
CTTTTAAATG CGGATGGCTC TGAGTTTATA ATATATAATA AAACGGACAA CAAAGTTGAA
ATGTGTGTAG CATCTGATTT ATTTTTAGAA AATTTTTCTA TACCATCCTT TGACTTAGAA
ATGTTTGGAG GTTTGTCACC GTTTGTAAAA CACTATATGG AGATAGAGCA TGCGGCAAAC
ATAGATTATG AGCATGATCC TTACGCTTCA AAATGGTATA TAGAAAAAGG GTTGAAATTT
ATAAATTCTA CATCTATAAA TACATATATA TACAATAAAG ACACTGCTTG CATGCTTCTT
TTTGCAAGAA AAAATGAAAT TCTTATATCA GAAATAGAAT TAAACATACT AAAGCTTATC
AATCAAGCTT TATTCAGCAT TTTTGTGGCA AGAAAATATC TTACAGATAT AGATTCTTTA
CACATTCATC TTGAAGAAAT TGCTACAAAA GATCCATTGA CAGGATTTTA CAACAAGGAT
ATGTTTGATA TGTTCTTAGA AAATGAAGTA AAAAAATCAG CCGTTAGGAT GTTGCCAAAT
GCTTTTAGTT ATATATTGAT AGATATAGAT AACTTTAAAT ATATAAACGA TGCCTACGGT
TATTCAGCTG GGGATATGGT CATAAAAGAA CTATCCAATA TATTAAAATC TAGCACTAGA
GCTCCAGATA TATTGGCTAG GATAGGCGGA GATGAGTTTG GAATAATTGC ACCAGATACA
AAAGTACAAT CTGCAAAGGT GATAATGGAG AGAATAAACG AGAGACTAAG TTCTCAGCCG
ATAATATTAG AAGATAAAAA AATATATATA AGTTTATCCG TAGGTATATC AACGTGCTTT
GAAAAAGAAG GGCAAAGCTT GCTAATATCT GGTTTCTCAG ATGATGATAA CACTCAAAAT
AAGCGCTTAT CTAAAGCGTT TTGTTCAAAA GAAGAGGTTA AGATGCTTGC CGAAGAAGCG
TTAAGAAAAG CAAAGAAAAG TGGGAAGTCT AGTGTGGTTA TAGCCTCTTT TGAAGATAAT
GATATAGAAT ATATTTCAAA ATACGAACTT ATAAACAATG CTATAAACGG AAATTTAATA
AAACCGGCGT TTCAGCCAAT CTTTGATCTT GAGGATAAAA AAATAATAGG TTTTGAAGCT
CTTTGTAGGA TAGAGATAAA TGACAATATA ATATATCCAG ATCAGTTTAT AGAAGAGGCT
GAAGATTTGG GGCTTATAAA TAAAATAGAT CTACTGATGA TAAGAAAAGC TTGTGAGAGA
ATATCAGCGT TAAATAAAAA AATTAATTCA CAAGATGGTT TAAGGCTTTT TGTAAACATA
AGCGCGAAGG CTTTTAAAGA TAGAAGATTT TTTCAGAATG TAGTTGATAT AGCAAAAGAG
TACGGTATGC AAAATAAGCT ATACATAGAA ATTACAGAAA GGGAATCTCT TTCTAATTTG
GAAAAATTTG AGGAGATAGA AGAATTTTTA AAATATTATG GTATCCATTT TGTAATAGAT
GATTTTGGAA GTGGATATTC TTCATTTTTA TATCTGAAGT TTATAAAAAC GGAGATTCTA
AAAATAGATG GGGCTTTTGT TAAAAACATA GTAAAAAACG AAAGGGATGT GGCGATAGTG
AGTGGTATAA ATACAATTGC TAAACATCTT AATACAAAAA CGTTGGCAGA GTTTATAGAA
AATGAGGAAA CTCTTGATGA ACTTGTGAAG ATAGGAGTAA ATTACGGTCA AGGGTATTAT
CTTGGTAAGC CAACTTTTGA TTTGGAGAAA TTCTTTCAAT AA
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| Protein sequence | MKVEAFKHIK HYLENINKKY GLVFSWLGLR KSDYTVFPLM SSKENEDYLK YVKLRWDDSP
YGNAPVPVGM AIKTAKIQYS NDMLNDKRFE PVYELLKKKN FLSMITVPLL KDDNKVFGVF
AGYSDKINFF NDEIIHSISR DVENINQELV KIYKDEIQIE EKINEYLSIL YDMITYINKG
TASNIDPKYL TVDVLNDLDK LLNADGSEFI IYNKTDNKVE MCVASDLFLE NFSIPSFDLE
MFGGLSPFVK HYMEIEHAAN IDYEHDPYAS KWYIEKGLKF INSTSINTYI YNKDTACMLL
FARKNEILIS EIELNILKLI NQALFSIFVA RKYLTDIDSL HIHLEEIATK DPLTGFYNKD
MFDMFLENEV KKSAVRMLPN AFSYILIDID NFKYINDAYG YSAGDMVIKE LSNILKSSTR
APDILARIGG DEFGIIAPDT KVQSAKVIME RINERLSSQP IILEDKKIYI SLSVGISTCF
EKEGQSLLIS GFSDDDNTQN KRLSKAFCSK EEVKMLAEEA LRKAKKSGKS SVVIASFEDN
DIEYISKYEL INNAINGNLI KPAFQPIFDL EDKKIIGFEA LCRIEINDNI IYPDQFIEEA
EDLGLINKID LLMIRKACER ISALNKKINS QDGLRLFVNI SAKAFKDRRF FQNVVDIAKE
YGMQNKLYIE ITERESLSNL EKFEEIEEFL KYYGIHFVID DFGSGYSSFL YLKFIKTEIL
KIDGAFVKNI VKNERDVAIV SGINTIAKHL NTKTLAEFIE NEETLDELVK IGVNYGQGYY
LGKPTFDLEK FFQ
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