| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0792 |
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| Symbol | |
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| ID | 6743597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 730401 |
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| End bp | 733484 |
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| Gene Length | 3084 bp |
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| Protein Length | 1027 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642750592 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_002121457 |
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| Protein GI | 195953167 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00116886 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGTCAT TTATAAATTT TGTTTTACAA AATAAAATAG TGTTTATATT TATAACTGTT
CTGCTTTTTA TATTTTCTAT ATTTGGCCTT AAAAAGCTTG ATGTAGAACC ATTCCCTGAT
TACTCTCCGG TAGTAGTAGA AATTACCGCT ATATACGCTG GACACTCCGC AAAAGAAGTA
GAAAAGCAAG TGACTATACC TCTTGAAAGT GCTCTTTCGG CAATACCTTA CGCCACTAAG
ATAAACACAC TTTCTTTGTA CGGACTTTCT GATGTGAAAG TTACATTTAG CTACGATATA
AGCTATGATG CCGCTAAACA GCACGTTATA AATAGGCTTA CCCAAGTTAA TCTTCCACCA
GGTGTACAAC CAGTTATCCA ATCAAACCCG GTGGGCGAGG TAATGAGATT TCAAGTAAGG
GGCTTAAAAC ACCAATCTCT TATGTACTTA AGAACCTTAG CAGATTGGCC TATATGTAGG
CAAATTAAAA CTGTACCAGG TATAGAAGAT TGCAATCCTA TTGGTGGTTT TGAAAAGCAA
TATCAGGTAA TAGTAGACCC TCAAAAGCTT GTAAAGTATA ACCTTACACT ATCTCAAGTA
CAAAACGCCA TAGCAAACGC CAATATAAAC GTAGGTGGCA ATTACACAGA AATAGGAGAG
CAAACATACA CAATCCGTGG TATTGGGCTT ATAAAAAATT TAAATGATAT AAAAAATATA
GTTTTAACAA ACTACAACGG TACGCCTATC ACCGTGGCAG ATATCGGTAA AGTAAGAATA
GGACATGCAC CAGTCCAAGG TTACATGGGG CTTAGTATAA GAGAACCAAA CGGAAAATGG
TATTCAAGAA ATCAAGTGGT AGTGGTAACG GCTGTTATGA GAAAAGACGC CCAGTCTGTA
CCTACTTTGA GAGCTTTAAA CAAAAAAATT AAAGAATTAA ACGAACAATA CAAATCTCAA
GGGGTGGAGT TGGTACCATA TTACACAAGA CAAACCCTTC TAAACGCTGT TATACATAAG
ATTAAAGAAA ACGCCACAAT AGGTATTATC TTGATACTTG CCATGGTGAT TTTCTTCTTG
GGAGATGTGC CAGTGGCTCT TATTGTTGCA TCTGTAGTAC CGGTTGCACT CATATCCACA
CTAGCTCTTA TGGCTATAAG AGGTGAAGAA GCAAATCTCA TATCTTTAGG AGCTGTAGAT
TTTGGTATTA TCATAGATAG TGCTATACTT TTAGCAGAAA ATATCTTTAG AATATCAGAA
GAAAAAGATA ATCATAACGC AGATTACGTT ATAGCTTACG CTACAATGGA TATAGGAAAA
CCAGTGTTAT TTTCTATACT TATCATAATA GCTTCTTTTA TACCACTTTT CATGATGAGC
GGAGCCCAAG GGGTTTTGTT TAGCCCTATG GCAAGAACCT ATGTATACGC TTTAGCTATA
GCTATAATCC TTACTTTTAC TTTTGTACCA TCTGCTATAG GTCTTGTCAA AAAACAAATA
GATAAAAAAG AACCAAAACT TCCCTTGTTG CTAACAAATT TTTATATTAA AATCCTAAAA
CAAATATTAA AAATAGCAAA ACCTTTTGCG ATAGTTAGTT TCATTGTAAT AGCTATTATG
CTGATAAGTT TCAAGTTTTT AGGAACAGAG TTTATACCAA CCTTAGATGA AGGTAATATA
TACCTAAGAA TTACATTTCC ATACAGCATA GCTCTTTCTA CATCCCATAA ATATGCCAAT
GAAGTAAGAC AGTATATGAT GACATTTCCA GAAGTAATCT CAGCAGATAG TAGAGCCGGA
AGACCTGAAG ATGGTACCGA TGACGTTGGC CCTTATGATA CAGAATATTC TATCCAGCTT
TTACCATATT CCAAATGGCC CTCTGGAATG ACTAAGAAAA AGCTTGAAAA TATAATGAGA
AAGCATCTGG AAAAAATGTT TCCTGGTGGT GATGTAAACT TTTCTCAATA TATCCAAGAC
AACTTTGACG AGGTGCTTTC TGGGGTGAAG GGTGAAAACT CTTTAAAAAT ATATGGACCA
AATTTAAAAG AATTAGATAA ATTAGGAAGA GAGATAACCC CAATACTAGA ACATGTAAAA
GGTATGGCAG ATGTAGGAAT GTATAAAGAA TTAGGACAAC CTGAGATAGA TGTAAGGGTA
GATAGAGAAA AAGCTGCAAG ATATGGTTTA AATACTGGAG ATGTTTTAAA TATAATACAA
GCTGCAATAG GAAGTTCTCC AGTGACAGAA GTACTAAAGG GTGATGAGCA ATTTGATTTG
GTTATAAGAT TTCCCAAAGA TTATAGGAAA ACTGCTAAAG ATATAGCTTC TATACCAATA
TTAACCCCCA CTGGACAGCT TATTAAACTT GGTGATGTAG CAAATGTACA ATATCATATA
GGAGCTTTCT TTATATATAG AGAAAATTAT CAAAGATTCT TACCTATAAA ATTTAGCATA
ACCACATCAA ACGTAGGGGG CGTTATCAAA AGCGCCAAAG AAGCTATAGC AAAATCTGTA
AAGCTACCAC CAGGCTATCA TCTTGAATGG AGTGGCGAAT ACAAACAGAT GATACAAGCT
CAGCACCAAA TGGCTATCAT AATACCAGTG GCTGTTTTCA TAGCTTTGGC TATTTTGTAT
CTTTACTTCA AATCTTTAAG ATATACTTTT GTAGCTTTTT CAAGTGCGAT AGTGGCTATA
GGCACTGCTA TAGTAACGCT CCTTGTCCTT AAAATGGCTT TTAGCGTTTC CTCTGCCATA
GGATTTATAT CTATAATGGG TGTTTCTATT ATGAATGGTT CTGTCATAGT GACCCAGTTT
ATTAGACTTT ATGAAAGTGG GTTATCAGTT TACGATGCTG TCATAGAAAC TATGAAAGAT
AAGTTTAGAC CTGTATTGAT GACAGGTTTA GTGGCAGCTT TAGGACTATT ACCTGCAGCT
GTAAGAACAG GTATAGGCAC ACAAGTGCAA AAACCTTTGG CTGTAGTGGT AGTAAGTGGT
ATGAGCATAG GTACTATTGC TACCTTACTT TTAATACCAG TGCTTCTTTA TATAATACCG
CCAAAAGATT ATGCTAAGTT TTAA
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| Protein sequence | MRSFINFVLQ NKIVFIFITV LLFIFSIFGL KKLDVEPFPD YSPVVVEITA IYAGHSAKEV
EKQVTIPLES ALSAIPYATK INTLSLYGLS DVKVTFSYDI SYDAAKQHVI NRLTQVNLPP
GVQPVIQSNP VGEVMRFQVR GLKHQSLMYL RTLADWPICR QIKTVPGIED CNPIGGFEKQ
YQVIVDPQKL VKYNLTLSQV QNAIANANIN VGGNYTEIGE QTYTIRGIGL IKNLNDIKNI
VLTNYNGTPI TVADIGKVRI GHAPVQGYMG LSIREPNGKW YSRNQVVVVT AVMRKDAQSV
PTLRALNKKI KELNEQYKSQ GVELVPYYTR QTLLNAVIHK IKENATIGII LILAMVIFFL
GDVPVALIVA SVVPVALIST LALMAIRGEE ANLISLGAVD FGIIIDSAIL LAENIFRISE
EKDNHNADYV IAYATMDIGK PVLFSILIII ASFIPLFMMS GAQGVLFSPM ARTYVYALAI
AIILTFTFVP SAIGLVKKQI DKKEPKLPLL LTNFYIKILK QILKIAKPFA IVSFIVIAIM
LISFKFLGTE FIPTLDEGNI YLRITFPYSI ALSTSHKYAN EVRQYMMTFP EVISADSRAG
RPEDGTDDVG PYDTEYSIQL LPYSKWPSGM TKKKLENIMR KHLEKMFPGG DVNFSQYIQD
NFDEVLSGVK GENSLKIYGP NLKELDKLGR EITPILEHVK GMADVGMYKE LGQPEIDVRV
DREKAARYGL NTGDVLNIIQ AAIGSSPVTE VLKGDEQFDL VIRFPKDYRK TAKDIASIPI
LTPTGQLIKL GDVANVQYHI GAFFIYRENY QRFLPIKFSI TTSNVGGVIK SAKEAIAKSV
KLPPGYHLEW SGEYKQMIQA QHQMAIIIPV AVFIALAILY LYFKSLRYTF VAFSSAIVAI
GTAIVTLLVL KMAFSVSSAI GFISIMGVSI MNGSVIVTQF IRLYESGLSV YDAVIETMKD
KFRPVLMTGL VAALGLLPAA VRTGIGTQVQ KPLAVVVVSG MSIGTIATLL LIPVLLYIIP
PKDYAKF
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