| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0772 |
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| Symbol | |
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| ID | 6743577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 702866 |
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| End bp | 705751 |
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| Gene Length | 2886 bp |
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| Protein Length | 961 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642750572 |
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| Product | SMC domain protein |
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| Protein accession | YP_002121437 |
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| Protein GI | 195953147 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00238509 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACCTT TGGTATTGGA GTTAGAGGGT TTTTTATCTT ACAAGGAAAA AACTGTTGTA
GATTTTTCTG ATCTTTCTTT GTTTGCCATC ACAGGAATGA CCGGAGCTGG TAAGACCACC
ATAATAGATG CTATCACATT TGCCCTTTAC GGTAAATGCC CAAGATTTGA AAAAGGAGCT
TCTAAAGAAG ACTACATATC AAAAGGAAAA GATTTTTTTA GAGTATCCTT AACATTTTCT
TTGAACGATA AAACATACAC CGTGGGAAGA TATTTAAAGA GCGGTAAAAA TATCGTAGTT
TCTTTAAAAG AAAATGGAAA AGAAATAATT ACAGAAGAAA AAAATAAGCT AAGGGAAGAA
CGAATAAAAG AAATATTGAA CATGGATTAC GATACTTTTA CAAAAGTGAT AGTTTTGCCC
CAAGGAGAAT TTGCAAAGTT TATTAAACCA GAAAGCCCCC AAGAAAGAAG AGAAATAATA
ATGAGATTAA GCAATTTAGA TAAAATAGAT AAAATGAGAG AGCTTGCAGC TTCTCAAAAA
AAAGATTTAA AAAATGAAAT AGATTCGATA TCGCTGACGA TAGATAACTT AAAATCTAAC
CAAGAAAATG TAGAAGAGCT TCAAAAGAAA CTAGATTCTT TGGAGCAAGA GCTTAGTGTT
AAAACTTCAG AAAAAAAAGT TTTGTTAGAA AGGTTTGAAA AAGCTAAGAA AAAGCAAGAA
TTGAAAAATG AACTTAGTAA ATTGATGATT GAATATGAAA ATTTAGAAAA CCAAAAAGAG
AAGATGGAGC TTATCAAAAA GCGTATTGAG TTTTTAAAAC CAAAACTTAG CCTAAAATCA
GATATAGAAA GGTATATAAA GTTAAAAAAC GAATTAGAGA AAACAACGCT TGAGCTTGAT
AAAAAAAATA AAGAGTATTT TTTGAAAGAG CAAGAATACA ATAAACTTTT GATTAATTTT
GAAACAATAA AAGCCGATTA CGAACAGACA AAATATCAAG AAGAGCGCGT AGAAAGAGGC
TATAAAATAA TATCGATATT AGAGAATGCA TTATCGATAG AATCTTATAT AACAAACGAT
GAAGCTAGAA TAAGGGATCT TGAACAGCAG TTGAAGACTA AAAAAGAAGA AAAATCAAAA
TTATTGGCTG AGATAGAACA CTATGAAAAT CTCTCAAAAG AAGAAAACAA AGAAGCTATT
GAAAAAGATA TTGAAAATCT TACAGCGATT ATAAGTCAAT TGGAGTTAAA AGAAAAAGAA
AAAGATAAAA AACTCTTAGA ACAAAAAAAA CTAATGGAAG AAGTAGACAA TATAAACAAA
GAGCTTTTAA AATACAAAGA AGAACAAAGA AATTTAGATC AAGAACTAAA CGCCAACAAG
AATAACATTG TTTTATATTA TAGCAACATG TTAAAAACCC TTTTAAAAGA AAACGATATT
TGTCCTGTTT GTGGTGGTGT TTATCACGAA AAAGAACATA CTACAATGCT AGATATAGAA
GTCGAAGAAG ATATCATAAA AAATATAGAA GATATTAAAA GCAAAATTGC TTTGTCAGAG
GATAGGCTAA AATCAAAAAA AGAAGCGTTG GAAAAACTCT CAGAAGAAAT AGAAAGCCTT
GAAAAGGAAT TGTTGGAAAA AGAGACTTTA CAATCAAGAT TAAAAGAATT AAAGCAAAGA
AGAGAATTTC AGGATAATAT ACAAAAAAAT TTAGAGAAAT TAAAAAGCAA AAAGGATAAA
TTGGAAAATG AGATTTTGCT TTTAAACAAA CAAAAAGAAG GTTTAGAAAA AGATTTATAC
AACAAAAAAG AATCATTGAA AACTTTAGAA AAAGAGCTTT TATCTTACGG TGTTAAAGAA
GGGCATTTGC AAAATAAAAA AAATGCTATA GACCAATATA AGAATAAGTT AGATGAGATA
AGAAACGAAA TACAAAATAA AAGAAAGATA TACGAAGATA CCAAAGAAAT GATAAATACT
TATGAAAAAA GTATCATGCT TTTAAAAGAA CAAGTATCTT CTTTGAGCGT CAAAAAAAGT
ACAATAAGCG AAGAACTAAA TGAGCTTGAG ACAAAATTGT CTTCTATAGA AGATAAAGAA
AAAGTATTAG AAGAGTTAAA CCGTTTAGAA AATTATGAAA GAACGTACAA TGAATATATG
GTAAAACTAT CCAATTTAAA AGAGCAGATA CAGTTAAAAG AAAATGAAAT AGTAAACATA
ACGGAAGAAG CACCACCCCA AGAGTTGGAA AACATGTTGG AAGTCTTAGA AGAATATGTG
AAAACGCTAA ATCAAGAAAT AGGTTCTATA AGCTCTAAAA TAAATCAGGC AAAAGAAAAC
GAAAAACAGA TAAAAGAGCT TGAAGAAACT ATAAAAGACC TTGAAAAGAA GTATAATATA
TATGAAAGAC TGGAACAAGA TTTGAAAAGC GATGCACTGC AAGCCTATAT ATCTCAGAAA
ATAATAGAAG AACTGGTAAA ATACGCTAAC GTATACGCTT CGAAAATGGA GTTTCCATAT
TTGTTTAAAG TTGAGGAAAA GTCTCGTGAA AAAGATAGTA TAGTAGTAGA AGACGCTTTT
GGAAATACAA GGCCTATAAA ATCTTTGAGC GGTGGCGAGA CTTTTATAAC GTCTTTGTGC
TTTGCTTTAG CACTCAGCGA AGCTGTGGGT TCTAAACATC TTAAATCACT TTTCATAGAT
GAAGGATTTG GTACGCTTGA TAAAGAAACT CTTGAAAAAG TAGGTAATGC TTTGGAGCTT
TTGAGCCAAA ATATAAATAA GATGGTAGGT ATTATAACAC ACGTTGAGAG TTTGGCTGAA
AAATTTCCAA ATAGGTTGAT AGTAACAAAA ACAAAGGATG GTAGCTCAAA AATAGAGGTT
GCATGA
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| Protein sequence | MRPLVLELEG FLSYKEKTVV DFSDLSLFAI TGMTGAGKTT IIDAITFALY GKCPRFEKGA
SKEDYISKGK DFFRVSLTFS LNDKTYTVGR YLKSGKNIVV SLKENGKEII TEEKNKLREE
RIKEILNMDY DTFTKVIVLP QGEFAKFIKP ESPQERREII MRLSNLDKID KMRELAASQK
KDLKNEIDSI SLTIDNLKSN QENVEELQKK LDSLEQELSV KTSEKKVLLE RFEKAKKKQE
LKNELSKLMI EYENLENQKE KMELIKKRIE FLKPKLSLKS DIERYIKLKN ELEKTTLELD
KKNKEYFLKE QEYNKLLINF ETIKADYEQT KYQEERVERG YKIISILENA LSIESYITND
EARIRDLEQQ LKTKKEEKSK LLAEIEHYEN LSKEENKEAI EKDIENLTAI ISQLELKEKE
KDKKLLEQKK LMEEVDNINK ELLKYKEEQR NLDQELNANK NNIVLYYSNM LKTLLKENDI
CPVCGGVYHE KEHTTMLDIE VEEDIIKNIE DIKSKIALSE DRLKSKKEAL EKLSEEIESL
EKELLEKETL QSRLKELKQR REFQDNIQKN LEKLKSKKDK LENEILLLNK QKEGLEKDLY
NKKESLKTLE KELLSYGVKE GHLQNKKNAI DQYKNKLDEI RNEIQNKRKI YEDTKEMINT
YEKSIMLLKE QVSSLSVKKS TISEELNELE TKLSSIEDKE KVLEELNRLE NYERTYNEYM
VKLSNLKEQI QLKENEIVNI TEEAPPQELE NMLEVLEEYV KTLNQEIGSI SSKINQAKEN
EKQIKELEET IKDLEKKYNI YERLEQDLKS DALQAYISQK IIEELVKYAN VYASKMEFPY
LFKVEEKSRE KDSIVVEDAF GNTRPIKSLS GGETFITSLC FALALSEAVG SKHLKSLFID
EGFGTLDKET LEKVGNALEL LSQNINKMVG IITHVESLAE KFPNRLIVTK TKDGSSKIEV
A
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