| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0699 |
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| Symbol | |
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| ID | 6743503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 633707 |
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| End bp | 635608 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642750498 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002121364 |
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| Protein GI | 195953074 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGCTG TATTTGTAAG CAAAGATTTT TCACAAATAA GTGTAAAAGA GTTTGAAAGT
ATAGAAGAGT TTAGTGAAAA TGTAACAGAT GACTATGAGT ATTTTATGTT AGAAGACATC
AACAGCGCGC ACAAGGTTCT GTGCCTAAAA CCCACAAGGC TTGTCAGAGA AAATTTGGAG
CTTTTAAGGC TTTTATTTAA AAAGCAAGTC ATTATGTTTT ATCAGCCTAT TTTTTCCAAT
AAAGATGGTT TTGTGTATGC CTACGAAGCT CTTCTTAGAG TGAAAAACGG AGATAGCTAC
ATATATCCAA AAGAAGTTTT TAGCATAGCC AAAGAGATGG GTATAGACTA TAAGCTTGAT
GCTATATGTA GAGAACAAGC TATAGCCCAG TATCAGCAAA AAGGTTTAAA GCTTTTTATA
AACATAAATC CAAACTCTTC AAACAGTGGA TTTTTTAAAA GAGGCTTTAC TTTAAACGTT
GTACTTCAAA ACAATCTAAA ACCCCAAGAT GTAGTACTTG AGCTAACCGA ATCAGAAAAG
ATAGACGATA TAGATATGTT AAAAGAGACG ATAAAATATT ACAAATCCGT AGGTTTTAGT
ATAGCCTTTG ATGATTTTGG TACAGGTTAT AACTCTTTGA ATATATTGAG CCACATAGAG
CCAGACTATA TAAAATTTCC TATAGAGCTT ATAAATGGTA TAGCACGGTC AAAACTAAAG
TGGCAGATAG TAAGGGGCAT CATGGATATG GCTATAAAAA ACGGCATAAG AACCATAGCT
GAAGGCATAG AAACTAAAGA GGATTTAGAG GTTGTTTTAG AGCTTGGTAT AGACTACTCT
CAAGGGTTTT TGTTGGCAAA ACCATCACCC TCCAAAGAGC TACCAAAAGA AGGTATCATG
CTTTTAAGGA ACATCATCAT CAAGAAAAAA CTAAACTCTG TAAAAGATAG GTACAGCATA
GCCAAAGAGG ACATTGAACC TATAAGGGTT ATAAAAGGGG CACCTGAGAT AAAAGAGCTA
ATAGATATCA TAAAGAAAAA CGATTTAAAA TGGTTATATT TGGAAGATTT TGATATTGCA
ATAAGTGAGA ACTGTATAAA GAGAATGCTA AATGCCTTCA GTGAAAATCT ATTTTACTAT
AAACCCATAG ATTACTTTTT TGAACACGTT GATTGCCATT ATGTACACCC AGAGAAAATA
GATATTCAAG ACAACATACT TCACGCTTAC AACTTAGCTA TAGAAAAGGG CTTAGAGATC
ATGATAGTTA AGAACAAGGA GATTGTAGGG GTTTTGACAA AAGCAAAGAT ATTGGAAAAG
CTCTTTGATA CATTCTACAA AATCACCCTT TATACAAACC CTCTAACGGG ATTGCCAGGT
AATGTGATTA TAGAAAAAGA GATTGAAAAT GCCATAGAGC AAAAAATAAA CGCCTATGTG
GTTTATATAG ATATAGCAAA CTTCAAGCCC TTTAACGATG CATATGGCTT TTTGGCTGGG
GATATGATGA TTAAGAAATT AGCCCAAACG CTCCAAACCT TTGCCTTTAA CTACGATGCT
TTCGTGGGGC ATATAGGGGG AGATGATTTT GTGGTGATTT TCAAAAATGT AAAGAATATA
AAACAAGTTT TAGAAATGCT TTATCAAGAA GCCCAAGAGG CTTTGAAGGA ACTTTACAAA
GGAGAGGACA TAAAAAGAGG TTATTTTGTA TCAAAAGATA GAGAAGGAAA CATAAAAGAA
TTTCCAATAG CGACTATCTC TATGGCCGCC ACAAGTACTC TAAACTACAA GAGCTCCCAA
GAGATATCAA AAAGGTTGGC AGAGCTTAAA AAAGAGTCCA AAAAACTTCT AAAACCTGTG
GTAGAAGAGT CAAGCGAAGC GCTTTTGGTA CAAACCACTT AA
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| Protein sequence | MRAVFVSKDF SQISVKEFES IEEFSENVTD DYEYFMLEDI NSAHKVLCLK PTRLVRENLE
LLRLLFKKQV IMFYQPIFSN KDGFVYAYEA LLRVKNGDSY IYPKEVFSIA KEMGIDYKLD
AICREQAIAQ YQQKGLKLFI NINPNSSNSG FFKRGFTLNV VLQNNLKPQD VVLELTESEK
IDDIDMLKET IKYYKSVGFS IAFDDFGTGY NSLNILSHIE PDYIKFPIEL INGIARSKLK
WQIVRGIMDM AIKNGIRTIA EGIETKEDLE VVLELGIDYS QGFLLAKPSP SKELPKEGIM
LLRNIIIKKK LNSVKDRYSI AKEDIEPIRV IKGAPEIKEL IDIIKKNDLK WLYLEDFDIA
ISENCIKRML NAFSENLFYY KPIDYFFEHV DCHYVHPEKI DIQDNILHAY NLAIEKGLEI
MIVKNKEIVG VLTKAKILEK LFDTFYKITL YTNPLTGLPG NVIIEKEIEN AIEQKINAYV
VYIDIANFKP FNDAYGFLAG DMMIKKLAQT LQTFAFNYDA FVGHIGGDDF VVIFKNVKNI
KQVLEMLYQE AQEALKELYK GEDIKRGYFV SKDREGNIKE FPIATISMAA TSTLNYKSSQ
EISKRLAELK KESKKLLKPV VEESSEALLV QTT
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