Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0689 |
Symbol | |
ID | 6743492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 620712 |
End bp | 622466 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642750487 |
Product | hypothetical protein |
Protein accession | YP_002121354 |
Protein GI | 195953064 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000917929 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAAAT TAAAAATGAA CAATAATACT TTCATGATTA TAGCTATATT CCTTTTGATA TTTACAACTA TTCCTTCATT GGTAGTACCA CTCGCACCAG CTGGTGATTT ACTGGATACA TCGTGGATGT GGGTTGTGGA GTATGCTCTT GTGCATCATT TGCAATGGGG CAAACAAATA ATATGGCCCG AAGGTCCGCT CGGTTTTTTG AGAATTCCTT TTTTTTATAG TGATCATCTA TTGTGGTTTA TAGCATCTAT ATCACAAATA CTTGCTAAGT TTAGTTTCTC ATTGTTGTTG ATCTACTTCT TATACTTTTA TATTATTAAA AACAAAAAGG ACAATATCAA CAATAGAATA TTTTTTTATT ATGTATTGAT AGTTGCAATT GTAGCTATAA TAACAATTTC TATTACAACT GCTTTTTATA TTATGGGTGC TTTTATAATT ATAAACACTT TTGATTACGA TTTCACAAAT AATAAAATAA TTACAATAAG ATATATTTTA TCAGGTATAC TATGGGCTTT GAGTTCTTTG ATTAAGTTTA ACGTTATCCC ACTTGCAGTA ATGTTTCTCT TGTTGTATCC GTTTTTAATA GGATATAGCT TTAAAAGCAA AAAATTATTT GTTAAAAGCT TTATAGGTTT AATTTCTTTT GTTGTAGCTT TTCTGCTTAT CCTTAAACTT ACTGGACAAG ATCTAATAAA TATACCATCT ATGCTTGTAG GAGTGTATGA AATTATAAAA GGATACGCTC AAGCAATGTA CTTGAACGGT AACCATGTTC AAACATTTGT AGCGATAATT ACAATCTTAT ATTTTCTATA TTTAATTTTA ATCTCTTACA AGAAAAAACA AAAAGTCCTA TTCTCCCAGC TTATTTTACT TTTTTTAATA TTGTTTCTTT CTTTTAAAGA AGGGTTCATT AGACATGATC CTGGTTTAAT AGGTGGCCAT GCTTTATATT TTTTCACAGT TTCTTTGACT GTGATAGCTT TTACTATATT GATTTACTCA AAACTAGAAT TTTCAAGCAA TTTTCTCAAT CTGATTTTTA TTTTAATATT CTGTTTCAAT ATTATTGGTG GTGCAATCAA TATTTTGCCG CCTTATAATT TTATACAGTT CTTAGAACTT ATTTCTTCCA AACATGCAAG AACGCAATAT CAGCAATTTA CCGATAATGC AATACGTAGT CAGTCTCAGC TTCCACCATC AATTGTTCAA GCTGTGGCTA ATAATCCAGT TACGATTATT GCATGGAACC TTATGATGGC ACAGGGTTAT CACTTTAAAT TCATTCCCGA GGTCATTCCA CAGACATATT CTGCATATAC CCCATATCTT GATGAGCAGA ACGCTAAACA GATTTTAAAT AACAATAATT TACAAAATAT AATTTATTCA TTTCAGGACA TAGATGGTAG ATATCCACTA TTCTCTGAAC CATATACTTT TGATGCAATT TTATCATGCT ATAAACTAAA AATCCCAGGG AACCCGTATA GTCTGTTTAC AAGAAAAAAC TCGTGCAATA ATTTAAATTT GTTTCCGATA TCAACTATAA GAGCTGAGTT TAATCAATGG GTTAAAGTAC CTCAAAACGC TGAGTTTATG GATATTGAAT TTAAAAATAC TCTTTTATCA CATATTATAG ATACTCTATA CAAACCCCTT TGCCATATAT ATATATATTC AAGCTTCGAA CAATGCGGTA GCTGGACCTC TTCGCGTAGT CCCTATGGTT TATAG
|
Protein sequence | MKKLKMNNNT FMIIAIFLLI FTTIPSLVVP LAPAGDLLDT SWMWVVEYAL VHHLQWGKQI IWPEGPLGFL RIPFFYSDHL LWFIASISQI LAKFSFSLLL IYFLYFYIIK NKKDNINNRI FFYYVLIVAI VAIITISITT AFYIMGAFII INTFDYDFTN NKIITIRYIL SGILWALSSL IKFNVIPLAV MFLLLYPFLI GYSFKSKKLF VKSFIGLISF VVAFLLILKL TGQDLINIPS MLVGVYEIIK GYAQAMYLNG NHVQTFVAII TILYFLYLIL ISYKKKQKVL FSQLILLFLI LFLSFKEGFI RHDPGLIGGH ALYFFTVSLT VIAFTILIYS KLEFSSNFLN LIFILIFCFN IIGGAINILP PYNFIQFLEL ISSKHARTQY QQFTDNAIRS QSQLPPSIVQ AVANNPVTII AWNLMMAQGY HFKFIPEVIP QTYSAYTPYL DEQNAKQILN NNNLQNIIYS FQDIDGRYPL FSEPYTFDAI LSCYKLKIPG NPYSLFTRKN SCNNLNLFPI STIRAEFNQW VKVPQNAEFM DIEFKNTLLS HIIDTLYKPL CHIYIYSSFE QCGSWTSSRS PYGL
|
| |