| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0679 |
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| Symbol | rho |
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| ID | 6743479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 609470 |
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| End bp | 610789 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642750474 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_002121344 |
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| Protein GI | 195953054 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000809271 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAAG ACATTACAAC CAAAGAAACT AACAAAGAGC TATCGCTAGA GGAACTTAAA
AAAATGACAA TATCCGAGTT ACAAAAACTC GGTAAAGAGT TTGATTTGAA AAGGATCACC
GGTATAAGAA AAGAAGAGCT CATAGAGAAT ATTCTTGAAG CTTACGGTAA AACAAAGGGT
TTAAGGTTTG TAAGAGGAGT ACTAGAAGTT TTGCAAGATG GATATGGATT TTTAAGAAGC
TCAAACAATA ACTACATGCC AAACCCAGAT GATATATATG TATCTCCGTC TCAGATAAAA
AAACTATATT TAAGGACTGG TGATACTATA ATAGGCTTTT CAAGACCACC AAAAGACAAT
GAAAAATATT ACGCTCTTAT AAAGATAGAG TCTGTAAACG GATTGCCTAT AGGTTCTTTG
GAGCTAAGAA GTAGATCGTC TTTTGATAAG TTGGTGCCGT ACCATCCTAC GGAGCGCCTT
AATATAGAAT ACAATCCATC AGACTATGCC ACAAGGGTGC TTAGTTTGGT TAGTCCTATA
GGTAAAGGTC AAAGAGGGCT TATTGTAGCA CCGCCAAAAG CTGGTAAAAC CGTTATTCTT
CAACGTTTGT CAAAGGCTAT TCTTACCAAC CACCCAGAAG TATACTTAAT TATTTTACTG
ATAGATGAAA GACCGGAAGA AGTTACTGAG ATGAGGCGTA TAGTGATGTC AAATGCAGAC
AATGCCGATC ATGAACCAGA GGTTATAGCC TCTACCTTTG ACGAGCCACC AGAAAGACAT
ATGCAGGTGG CTGAGCTTGT TATAGAAAAA GCCAAAAGAC TTGTGGAGCT TGGAAACGAC
GTGGTAATAC TTCTTGATTC TATGACAAGG TTTGCAAGAG CTTCCAATGC CGTAACACCA
CCAACAGGCA GGGTGCTTTC AGGTGGTATA GAAGCTACAG CTTTACAAAG ACCCAAGAAA
TTCTTTGGAG CCGCTAGAAA TATAGAAGAT GGTGGAAGTC TAACCATCAT AGCTACAGCG
CTAATAGAAA CTGGTTCTCG TATGGATGAT GTTATATATG AAGAGTTTAA AGGTACAGGT
AATATGGAAG TGCACCTTGA TAGAAGGCTG ACAGAGAAAC GTATATTCCC AGCTATAAAT
ATAAGCAAAT CCGGCACAAG AAAAGAAGAG CTACTTTTAT CGGATTGGGA GTTGCAGCGT
ATCTGGGTTC TTAGAAAATT CTTCTCTTCT ATGGATGACG TAGAAGCGAT GGAGTTTTTA
CTTGATAAGC TCAAAAAGTT TAAAACGAAT CAAGAATTTT TAAAAGCGAT GAACGCTTGA
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| Protein sequence | MEQDITTKET NKELSLEELK KMTISELQKL GKEFDLKRIT GIRKEELIEN ILEAYGKTKG
LRFVRGVLEV LQDGYGFLRS SNNNYMPNPD DIYVSPSQIK KLYLRTGDTI IGFSRPPKDN
EKYYALIKIE SVNGLPIGSL ELRSRSSFDK LVPYHPTERL NIEYNPSDYA TRVLSLVSPI
GKGQRGLIVA PPKAGKTVIL QRLSKAILTN HPEVYLIILL IDERPEEVTE MRRIVMSNAD
NADHEPEVIA STFDEPPERH MQVAELVIEK AKRLVELGND VVILLDSMTR FARASNAVTP
PTGRVLSGGI EATALQRPKK FFGAARNIED GGSLTIIATA LIETGSRMDD VIYEEFKGTG
NMEVHLDRRL TEKRIFPAIN ISKSGTRKEE LLLSDWELQR IWVLRKFFSS MDDVEAMEFL
LDKLKKFKTN QEFLKAMNA
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