Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0635 |
Symbol | |
ID | 6743434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | + |
Start bp | 567557 |
End bp | 569257 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642750429 |
Product | succinate dehydrogenase or fumarate reductase, flavoprotein subunit |
Protein accession | YP_002121300 |
Protein GI | 195953010 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0393941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAAGT ACGATATAGT TATAATAGGC GGTGGCGGTG CTGGATTAAT GGCTGCCATA GAAGCTTCTA AAGATAAAAA CATAAAAATA GCAATTGTTT CTAAAGTTTT TCCAACAAGA TCTCATACCG GTGCTGCTCA AGGTGGTATG AACGCCAGCA TAGGAGTAGC TGATCCAAAC GATTCACCAG AAAAACATGC TTTTGATACC ACAAAAGGTG CCGATTTTTT AGCAGACCAG CAAGCTGTCT TGTTTATGTG CAAGAATGCC CCAGACATGA TATACGAGTT AGATAGAATG GGTGTTCCAT TTTCAAGGAC AATCGACGGT AAAATAGCAC AAAGACCTTT TGGGGGAGCA TCTTTTCCAA GAACTGTTTA TTCCGCAGAT AGAACAGGTC ACGTACTTCT ACATACACTA TTTGAACAGG CAATGTCAAA AGAAAATATA GACTTTTTCA ACGAGTATTT TTTGCTCGAT TTAGATATAG AAAATGAAAA AATAGAGGGT GTTGAGCTTT TAAACATAAA AGATTCAAGT GTATTGTATA TAAAGACGAA GGTTTTAATA TTAGCAGGTG GTGGCTTTGC AAGAATATAT TGGCATAGAA GCACAAATGC CTCAGGCAAC ACAGGAGATC TGCAAGCTAT AGCGCTTAGA AAAGGTATAG CTTTAAAAGA TATAGAGTTT ATCCAATTTC ACCCAACGGG TCTTGCCAAA ACTGGTATAC TGCTTTCAGA AGCTTCAAGA GGAGAAGGTG GATACCTTTT AAATGTTAAA GGCGAAAGGT TTATGGAGAA ATATTCTCCA AATAAAATGG AACTAGCTCC GAGAGATATA GTATCAAGAT CGATAGAGCT TGAAATAAAG AGCGGGCTTG GTGTAGGAGA AGGAACATCT GCGTATGTGT ATTTAGATTT AAGACATTTG GGAGAAGAAA AAATAAATGA ACGATTACCT CAGGTAAGGC AATTAGCCAT CGATTTTGAA GGCGTAGACC CTGTAAAAGC TCCTATACCT ATAAGACCCA CAGCTCATTA TTGCATGGGT GGTATAGATG TTGTTGATTT TAAAAGCTCC CAAACCAGCG TAAAAGGACT TTTAGCTATA GGAGAGTGTG CTTGCGTATC AGTACATGGT GCAAACAGGT TAGGAGGTAA TTCCCTTACT GAGCTTGTGG TGTTTGGCAA ATATGCTGGT GAATATGCAC GTGAATATGC AAAAGATTTC GATTTTTCAA ATAGAAACCC TACAACAAAA GCTGAAGCTT ATGTAAACTC TTTGATGCAA AGAGAAGGAA ATGTTAAATT GTATGAGGTA AGAAATAAAA TGGGGGAAAT AACATGGTTT AACATGGGTA TATTTAGGAC AGAAAGCTCT TTGAAAGAAG CTTATAAAGA ACTCACAAAA CTATTGGATA TGTGGCATTA TATACCAGTC TCAGACAAAT CGAGAATATT TAATACAAAT CTTATTGAGC TTTTAGAGTT AAGAAATATG CTTGAATTAT CAAGAGCGGT AGCTTTATGC GCTTTAAACA GAAGAGAATC AAGAGGTGGG CATTGGAGAG AAGATTACAA AGAAAGAGAC GATGAGAATT TTTTAAAACA TTCGCTGGTA CAATATAAAA ATGGTGAGCT TAGCTTAAGC TACAAAGAGG TAGATACAAG CATTTATAAA CTGGAGGAGA GAAAGTACTG A
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Protein sequence | MLKYDIVIIG GGGAGLMAAI EASKDKNIKI AIVSKVFPTR SHTGAAQGGM NASIGVADPN DSPEKHAFDT TKGADFLADQ QAVLFMCKNA PDMIYELDRM GVPFSRTIDG KIAQRPFGGA SFPRTVYSAD RTGHVLLHTL FEQAMSKENI DFFNEYFLLD LDIENEKIEG VELLNIKDSS VLYIKTKVLI LAGGGFARIY WHRSTNASGN TGDLQAIALR KGIALKDIEF IQFHPTGLAK TGILLSEASR GEGGYLLNVK GERFMEKYSP NKMELAPRDI VSRSIELEIK SGLGVGEGTS AYVYLDLRHL GEEKINERLP QVRQLAIDFE GVDPVKAPIP IRPTAHYCMG GIDVVDFKSS QTSVKGLLAI GECACVSVHG ANRLGGNSLT ELVVFGKYAG EYAREYAKDF DFSNRNPTTK AEAYVNSLMQ REGNVKLYEV RNKMGEITWF NMGIFRTESS LKEAYKELTK LLDMWHYIPV SDKSRIFNTN LIELLELRNM LELSRAVALC ALNRRESRGG HWREDYKERD DENFLKHSLV QYKNGELSLS YKEVDTSIYK LEERKY
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