| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0628 |
|---|
| Symbol | |
|---|
| ID | 6743426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | + |
|---|
| Start bp | 560828 |
|---|
| End bp | 561604 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 642750421 |
|---|
| Product | ribonuclease BN |
|---|
| Protein accession | YP_002121293 |
|---|
| Protein GI | 195953003 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1295] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.813262 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAACC TAATAAACTT TGTATTAGAC TTTTTTAGAT TAAAAATACT TTATCATGCC
GGTGCTTTGT CTTTTAGTTT TATAATGTCA ATAGTACCCC TTATACTTGG GGCTGGTTTT
TTTCTGCATA TGTTTTTAGA AAATAAAATA GACAATTATA TATATCACTT TAGCGCTGTG
TTCCCAGATT TTACAAATAA AATAATAAAA GACATATCCT ATTTAGAGCA AAAGAGGTTA
AAAGCAGGTA TTATAGGAGC TTTGGTATCT CTATATTTTT CTACTGGATT TATAAAAGAT
TTAGATTATG CCATAGCGTT GATGTGGGAT AAAAAAGAGG CAAAACGCAT AGAGGTTATG
TATTTCTTGT ACCTAATGTT TTTTGTTGTA GTATTTACTG GTGGTTCTGT TTATTTGTTT
TATATAAGCT TGATGTTCAA ACATCTTAAT CTACCTTTGG AATTTACTAA AAATCTCAGC
TATTTACTGT TTTTTACAGT ATTTTTTTAT TCTGTATATA GCATTTTTAT ACAAAGCAAG
AATATTCGTA AAATTTATGT ACTTGCAGTA TCCGCTGTAG AATCCTTAGC TTTGTTGCTT
TTAAAATATA TAATAACAGT ATACATATCA CACTTACTTA TTAAAAGCAT AGTTTACGCA
TCGCTTTGGT TAATAATAGC TTTCTTGATA TGGATAGATT GGTTAATGGC ATCCTTGCTC
TTGGGAGCCA GAGCTTTGTT TTATATTCAT AAAAGCCTTG CAAACAATTT ATATTAA
|
|---|
| Protein sequence | MKNLINFVLD FFRLKILYHA GALSFSFIMS IVPLILGAGF FLHMFLENKI DNYIYHFSAV
FPDFTNKIIK DISYLEQKRL KAGIIGALVS LYFSTGFIKD LDYAIALMWD KKEAKRIEVM
YFLYLMFFVV VFTGGSVYLF YISLMFKHLN LPLEFTKNLS YLLFFTVFFY SVYSIFIQSK
NIRKIYVLAV SAVESLALLL LKYIITVYIS HLLIKSIVYA SLWLIIAFLI WIDWLMASLL
LGARALFYIH KSLANNLY
|
|---|
| |