| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0626 |
|---|
| Symbol | |
|---|
| ID | 6743424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | + |
|---|
| Start bp | 559485 |
|---|
| End bp | 560723 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 642750419 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_002121291 |
|---|
| Protein GI | 195953001 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.650783 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAC TCAAAGGACT AAAATGTAGA GAATGCAAGC GTGAATATCC TATAGAACCA
ATACACGTTT GTGAGTTTTG TTTTGGTCCT TTGGAAGTAA ATTATGATTA TGATTATATT
AAAAGCACAA TAAACAAAGA AAACATATCA AAAGGTCCAA AAAGTTTATG GAGATACATA
GATTTGTTAC CTGTAGAAAA TCCTACCGTT GGGCTAACAG CAGGCTTTAC CCCTCTTAAA
AAAGCAGATA AACTTGGAAA AATACTTGGT CTTAACAATT TATATATAAA AGATGATTCG
GTAAACCATC CAACACTTTC TTTTAAAGAT AGAGTTGTAT CTGTAGCTTT ATCCAAAGCA
AAAGAATTTG GTTTTGATAC CGGGGCTTGC GCATCCACCG GTAATTTGGC AAATTCTGTA
GCAGCTCATT GCGCTCAATC AGATCTAAAT TGCTACGTTT TTATACCTGC AAATCTTGAA
TCCCAAAAAA TTATCGGTAG TCTTGTTTTC AATCCTACAG TGGTGGCAGT AAATGGAAAT
TACGACGATG TAAACAGGCT ATGCTCAGAA ATTGCCAACG ATTTAGGATG GGCTTTTGTA
AATATAAATA TAAGACCATA CTATGCAGAA GGTTCAAAAA CCCTTGCTTT TGAAACTATA
GAGCAACTTG GGTGGATAGC TCCAGATGCT ATAGTAACTC CAGCGGCAAG TGGCTCCCTT
TTAACAAAGA TTTATAAGGG TATAGAGGAA TTTTACAAAG TAGGTTTGAT AGACAAATAT
AACACTAGGG TATACGGGGC TCAAGCCCTA GGATGTTCAC CGATAGCCCA AGCTTTTAAA
GAAGGGCTTG ATTTTGTAAA ACCAGTAAAA CCAAATACCA TAGCAAAATC AATAGCCATA
GGAAATCCGG CAGATGGTAT TTATGCTCTT GATGTGGTAA GAAAAACTGG TGGCACATGG
GAAACAGCCG ATGACAATGA AATAATAGAA GGTATGAAGC TTTTAGCTCA AACAGAAGGG
ATATTTACAG AAACAGCGGG CGGTACCACT ATAGCTGTAT TGAAGAAATT AGCTCAGCAA
GGGCACTTCA AGCCAGATGA AATTGTAGTA GCATATATAA CTGGTAATGG CTATAAGACT
ATGGAAGTAT TGGAAGGAAA ATTAAACGAG ACGATACATA TAAATCCAAC GCTTAAGGAA
TTTAAAGAGG TAGTCCTCAA AAGGACTAAA GGAGCTTGA
|
|---|
| Protein sequence | MAKLKGLKCR ECKREYPIEP IHVCEFCFGP LEVNYDYDYI KSTINKENIS KGPKSLWRYI
DLLPVENPTV GLTAGFTPLK KADKLGKILG LNNLYIKDDS VNHPTLSFKD RVVSVALSKA
KEFGFDTGAC ASTGNLANSV AAHCAQSDLN CYVFIPANLE SQKIIGSLVF NPTVVAVNGN
YDDVNRLCSE IANDLGWAFV NINIRPYYAE GSKTLAFETI EQLGWIAPDA IVTPAASGSL
LTKIYKGIEE FYKVGLIDKY NTRVYGAQAL GCSPIAQAFK EGLDFVKPVK PNTIAKSIAI
GNPADGIYAL DVVRKTGGTW ETADDNEIIE GMKLLAQTEG IFTETAGGTT IAVLKKLAQQ
GHFKPDEIVV AYITGNGYKT MEVLEGKLNE TIHINPTLKE FKEVVLKRTK GA
|
|---|
| |