Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0619 |
Symbol | |
ID | 6743417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | + |
Start bp | 552746 |
End bp | 554767 |
Gene Length | 2022 bp |
Protein Length | 673 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642750412 |
Product | TonB-dependent receptor |
Protein accession | YP_002121284 |
Protein GI | 195952994 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000412727 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAAGA AAGTGCTTCT TAGTCTTTGT GTTTTCTCAT CTATTGGTCT TGCACAAGAT TTTTCAAGTA TCTTCTTGCT AAAACCTTTA GAAATAATTG GTAGTTCAAA AGGTTTTGAG GCTTTTAAAA GCAGTAAAAC ACTACAAAGA AAAAGCAGTG TGGATTTAGC TCAAGCTCTT GACAATCAAG TTGGTATATT TAACTATTCC AAAGGTCCTA TTGCAAACGA TATAGTTTTA GATGGTCTAA ACAGAGACAA TATAAACGTT TTGATAGATG GGGCGAGGCT TTACGGAGCA TGTCCAAGTA GGATGGATGT ACCAGCTTTT CACATACCTC TAAACTTTCT TCAGGGGATA AAAATCGTAT ATGGCCCCTA CGACGTAACG CACCAAGGTT CTATGGGTGG CTTGGTAGAC GTCAAAACCA TATATCCAAA ACTTGGATTT CACTCAAATT TATCGTTTAA TGCAAACTCT TACGGATTTG TAAATCCAAA CGTAGAGGCT TCTTACAACA ACGGCAAGTT TTACTTTGTG GCAGGGTATT CTTTTAAAAC CGCCGAACCT TACAAAGACG CTCATGGTGT CAAAATCACA GATTATATAC CAAACGAGTA TAAATCTAAA CCAACCCATG ATTTTAACAT AAACTCTTAC ATGACTAAAT TTGGCTTTAC ACCCACTACA AATACAGATA TAGGTTTAGA ATATATAAAG CAAAGCGCCA ACAACGTGCT GTATCCATTT CTTAGTATGG ATGCCATATA CGATAGATCA AATATCGTTA ATTTTCACAT AGACAAAGAA AACATCTCAA AGGATATCAA AAGTATAAAC TTCAAAACTT ACTATACAGA CGTATATCAC CTTATGACAA ACCAATATAG ACCTCAACCG TACATGGCCA CCTACGCTCG CACAAAAACC TACGGTTCTT CCATTTCCAC AGATGTATTT GATACCACCT TTGGGCTTGA TTTTTACAGA AGAGATTGGT ATGTGTTAAA TCAAACATCA ATGGGCATGA GTCCTCCCTA CATAATCCCA GATGTGTTTA TTACAAACAT AGGTGCTTTT ACTAAAAAAG ATTTTAATGC TTTTAAAAGC CTAAAAATAA ACATAGGCCT TAGAATAGAC CATACAAAAT CATCACCAGA CGGTTCTTTG GTGAAAAAAG ATCTATCTTA CCAAAATATG GGATATTCAT ACGCTTCACT TTATGGAGCA TCACCACAAG ACAAAGAAGA CACATATCTA AGTGGTTATA TAAAGCTTAA TAAAACCATT AACCAATACA ACAATTTTTA CGTTGGCTTT GGGCATACTG TAAGAGTACC AGATCCAGAA GAAAGGTACA TATATTTTGT AAACATGGGT AAATATTGGA TAGGAAATCC TAACCTAAAA CCAGCCCAAA ACAACGAGTT TGATGTAGGA CTTTCCTCTA ATTACAACAG ATTTTCTATG AACCTTGATC TTTATTATAG ATATATATAC GATTATATAA CCATAACACA ATTTTCTAAC CCAAAAGGAA AGATAAACGA ATATTGGAAT ACAAACGCCT ATATGAATGG TGCCAATCTA AGCGCTAAAT ATTTTATAAC AGATACTCTT AGCGTATCAT CAGAAACCTC CTACGTTAGA GGTTATCAAA TAACAAACCA AGCTAAGCAC ATCACAAGCC CAAATCTACC AGACATACCA CCTTTTAGGG AAGTCTTGGC GCTAAAATAC GACAACAAAA CATACTTTGG TAAAATAGAG ACCATCTTAG CAAGCACTCA GGATAAAGTA AACACAGATT TAAACGAGAA AAAAGTACCA GGTTATGGCT TGGTAAACGT ATCTGGTGGG ATAAATCTTA AAAACGGCAT ATCGGTAGTG CTTGGGGTTG ATAATCTTCT AAATCAAGAA TATTACATGT ATAACGATTA TTACTCAAAT CCTTTCAATA TAGGAGTAAA TTTACCAGAA CCAGGACGCA CATTTTATAT AAACGCTCAA TATAGTTTTT AA
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Protein sequence | MVKKVLLSLC VFSSIGLAQD FSSIFLLKPL EIIGSSKGFE AFKSSKTLQR KSSVDLAQAL DNQVGIFNYS KGPIANDIVL DGLNRDNINV LIDGARLYGA CPSRMDVPAF HIPLNFLQGI KIVYGPYDVT HQGSMGGLVD VKTIYPKLGF HSNLSFNANS YGFVNPNVEA SYNNGKFYFV AGYSFKTAEP YKDAHGVKIT DYIPNEYKSK PTHDFNINSY MTKFGFTPTT NTDIGLEYIK QSANNVLYPF LSMDAIYDRS NIVNFHIDKE NISKDIKSIN FKTYYTDVYH LMTNQYRPQP YMATYARTKT YGSSISTDVF DTTFGLDFYR RDWYVLNQTS MGMSPPYIIP DVFITNIGAF TKKDFNAFKS LKINIGLRID HTKSSPDGSL VKKDLSYQNM GYSYASLYGA SPQDKEDTYL SGYIKLNKTI NQYNNFYVGF GHTVRVPDPE ERYIYFVNMG KYWIGNPNLK PAQNNEFDVG LSSNYNRFSM NLDLYYRYIY DYITITQFSN PKGKINEYWN TNAYMNGANL SAKYFITDTL SVSSETSYVR GYQITNQAKH ITSPNLPDIP PFREVLALKY DNKTYFGKIE TILASTQDKV NTDLNEKKVP GYGLVNVSGG INLKNGISVV LGVDNLLNQE YYMYNDYYSN PFNIGVNLPE PGRTFYINAQ YSF
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