| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0603 |
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| Symbol | |
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| ID | 6743399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 537419 |
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| End bp | 538492 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642750394 |
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| Product | twitching motility protein |
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| Protein accession | YP_002121268 |
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| Protein GI | 195952978 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTTAG AAATATTGTC AAAAGCCAAA GAAGCTTCAG TTTCGGATAT TCACCTAAAG
GTAGGTGCAA AACCTTTTTT TAGAGCACAT AAAAAACTAT ACCAAGAGGA GTCTTTACAA
GTAATCACAG AACAGGATAT GCAAAATATT GTGCAGGAGC TTACAAAAAA GTATCCAGCC
AAGCTAAATG AATTTCAAGA AAGAGGAGAA ATAGATATAT CTTATGAAAC AAATTTTTCA
AGATACAGGG TAAACATATA CAAGCAAAAA GGATATACAG CTATAGCTCT AAGAGTGTTA
TCAAACTTTA TACCTCGCCC AGAAGAGATA AACCTGCCAA AGGTAATGGA AGATGTTGTG
CTAAAGTATA CAAAAGGTAT TATATTGGTA ACAGGTCCCA CTGGCAGTGG TAAATCCACA
ACACTTGCTT CGTTAATAGA TAGAATAAAC GAGGTTTACG ATAGAACAAT TATAACCATA
GAAGACCCTA TAGAATACGT TTATAAAGAT AAAAAATCTT ACGTAGTCCA AAGAGAGGTT
GGGCTTGATA CCATGTCTTT TCAAAGTGGT CTAAGGGCAG CTTTAAGAGA GGACCCGGAT
GTAATACTTG TAGGTGAAAT AAGGGATACA GAAACTGCTC TAATAGCTCT TCAAGCCGCT
GAAACCGGAC ACCTTGTTTT TTCTACACTT CATACAATAG ATGCAAAAGA AACCATAAAT
AGATTTATAG GCATGTTTCC ACTGGAGATG CGAGAGCAAA TAAAACTCAT GCTAGCAGGT
TCTCTTGTTG CTATTTTTAG CCAAAGGTTG TTACCAAGAG TTGACAAGTC TGGAGTAATT
CCAGCGATAG AAATTCTTCT AAATGTAGGT GCCGTAAAAG ATATATTGTT GGACCTTACA
AGGCTAGATG AAATACCAGA GCTTTTAAGA CGCAACAAAG CAGCCTACGG TACCCAGGAC
TTTGATACAC ACTTGTTAGA GCTATATAAC AGAGGTATTG TATCGAAAGA AACAGCGCTT
TTACAAGCAT CCAAACCTCA GGACATGGCA TTAAAGATGC AAGGTATAAC ATGA
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| Protein sequence | MLLEILSKAK EASVSDIHLK VGAKPFFRAH KKLYQEESLQ VITEQDMQNI VQELTKKYPA
KLNEFQERGE IDISYETNFS RYRVNIYKQK GYTAIALRVL SNFIPRPEEI NLPKVMEDVV
LKYTKGIILV TGPTGSGKST TLASLIDRIN EVYDRTIITI EDPIEYVYKD KKSYVVQREV
GLDTMSFQSG LRAALREDPD VILVGEIRDT ETALIALQAA ETGHLVFSTL HTIDAKETIN
RFIGMFPLEM REQIKLMLAG SLVAIFSQRL LPRVDKSGVI PAIEILLNVG AVKDILLDLT
RLDEIPELLR RNKAAYGTQD FDTHLLELYN RGIVSKETAL LQASKPQDMA LKMQGIT
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