| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0563 |
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| Symbol | |
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| ID | 6743359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 499171 |
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| End bp | 501711 |
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| Gene Length | 2541 bp |
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| Protein Length | 846 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642750354 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002121228 |
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| Protein GI | 195952938 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAAAT TGAAAAAACT CAGCGTTTTT ATATTGCTAA TAGCGGGACT TGTGTCTGTC
TTAGTAGCTG CAACTCTAAT TGTTACGATG AATACATACA TAAATGATGT TAAAAGCATA
ACTATACAAC AATCCAAAGC TTTAGCTCAA CAAACGTTTA GTGATATGTT TCAAATAATG
AAAACAGATT GGACTAAAGA ACAACTAGAA GATTTCCTTA AAAGTTTAGA AACTGCCCAT
AAAAATTCTA ATACCAAAGT TTATATATAT AGAGGAAAGT TGGTAGATGA GTTATTTGGC
AAAATAAATC AGAAAAAACC TAGCCCTTAT GTTGATAAGG TATTCAGAAC TGGAACATTC
TATTCTTATA AGACCGACTC ATCTATCAGA TATTTTTATC CGTTAAAGGC TCAAAATGTA
TGCTTAAGAT GCCACATAAA CGCTAAAGTT GGAGATACGC TAGGCGTTAT AGAAGTAAAA
TCAAACATAT ATAATGCTAT ACACAAAATA GAAGTTGATA TTTTTAAAAG TTTATTCTTT
TCTTTGGTTG TTATCGTTGC AGGAGCATCG TTTGTATCGT TTGTAATTAT GAAAGTAATT
CATTCCAATG TAAATAAATT TAAAAAAGAA ATAGAAAACA TAGTTTCTGT AGATGACTTA
ACCAAAATAA ATTTTAGTAA CATAGATTTT TTCTTCAATG AAATAAATGA GATAAGAGAT
AGTATATCTA CTCTTGTAGA AAAATTAGCT AAGATTACTG TAGATAAGGA AATACTAGAA
TTTGAGATAA AACTATTAGA GCAATTTATA ATTACATCAG AAGCTATAGC AAATTGGCAA
GAATTTTTAG AAGGTCTATT AAAAGATATA GCTAAGCTTA TGGACTTTGT ATTTTTCTAC
ACTATTTTCA GAACTGGAGA AGATAAGTTT GAATCGTTTA TTTTTTGGAG ATGTAAATGT
GAAGGCTACA AGAAAAAAGT AGAAGAAGAT ATTTTGAAAT CCCTTAAAAC TTCTGGTATA
TACGTGCCTG GTGCAAAGGT GGACTTTCAA CATATCTTGC TTGAAAATTC AATAGAAATA
ATAGATTACG AGAAAATAGC TAAGTTGTCA AAGAATCTTA TACTAGAAAA GCCGTTGATA
GGTGGTTCAG TAGGTATAGG TATAAGCTTT CAAGCTAGTG AAAACGAAGT TAAAAAGATG
GCTGTAGAAG CTTTATTAGC AACGATTTTA AATATTATAG GTTCTATAAA AGCTATAAAC
AAATATACTA AAGAGCTCGA ATATTATGCT ACTAGAGATC CGCTTACCAA TCTTTACAAT
CAGAGAGTTT TCTGGGAGCT ATTAGAATAC GAAGTAGAGA GAGCCAAAAG GCATAATTAT
AAATTTTCTT TGTTGGTTAT AGATTTTGAT AATTTCAAAT TAATTAATGA TGCATATGGT
CATACGGTCG GTGATAATTT TTTAAGGAGA GTAGCTAAAA TAATAGAGGC CAATTTTAGA
AACGAAGACA TAATAGCAAG ATATGGCGGA GACGAATTTG TAGTTATAAT GCCATATACT
GATGCAGAAC AAGCTTTCAG CGCCTCTAAA AGACTATTAG ATGATATAGA TAAGTTTTCT
ATGGAAGTAA ACAGTGGCAA ATATGCAAAA GCAACGATCT CTATAGGAGC TGCGGTGTAT
CCAGACCATG CTAGAGCGGC AAAAGAGTTA TTTGTCTTAG CCGATAATCT GTTATATAAA
ATGAAAGAAG AAGGCAAAAA CGGTATAAAA TTGCCGTCAG ACGAAGATCT GGGAGTGTTT
GCGCAAGAAT TTGGGAAAAT CAGTTTCTTG CTAATGGAAA CGATAGATAA GAAAAAAGTA
ATTCCATATT TTCAACCTAT AATAGATATA AAAACTATGA AACCATATGC ATATGAAGTA
TTGATGAGGA TAGAAGATAA TGGAGAAATA TTATCAGCTT ACAAATTTAT AGAGATTGCC
GAGACACTAG GATTAGTGTA TAAACTTGAT TATATTTTAA TAGAAAAAGC TATAGATACT
ATAGTTAAAC ATAAATTGCC GGATAATATT AAAATATTCT TTAACCTTTC CCCTAAATCT
CTAATAATAG GGGATTTCAT AGACAAAGTT AAAAGCATTC TAACACAATA TAGCTTTCCA
TCTACCCGCA TAGTATTTGA AATTACAGAG AGAGATACAA TAAAAAATAT AGAAATAATA
AAAAAATTTG TACAGGCTTT GAAGTTAGAA GGCTTCTCTT TCGCTATAGA TGATTTTGGT
GCAGGTTTTG CTTCTTATGC ATATATCAAA CACTTTCCAA TAGACTTTGT AAAAATAGAT
GGTGAAATAG TAAGAACGAT GACTTCTAAT AAAATAGATG AAGCATTCAT AAAAAGCACT
GTAACATTAA CAAAAGCCTT AAATATGAAA ACTATTGCAG AATTCGTCGA AAATGAAGAG
ACGTTACAGG CTCTAATTTC TGCTGGTATA GATTTTGTTC AAGGGTATTA TGTAGGCAAA
CCTTCAAAGA ATTTATTATA A
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| Protein sequence | MLKLKKLSVF ILLIAGLVSV LVAATLIVTM NTYINDVKSI TIQQSKALAQ QTFSDMFQIM
KTDWTKEQLE DFLKSLETAH KNSNTKVYIY RGKLVDELFG KINQKKPSPY VDKVFRTGTF
YSYKTDSSIR YFYPLKAQNV CLRCHINAKV GDTLGVIEVK SNIYNAIHKI EVDIFKSLFF
SLVVIVAGAS FVSFVIMKVI HSNVNKFKKE IENIVSVDDL TKINFSNIDF FFNEINEIRD
SISTLVEKLA KITVDKEILE FEIKLLEQFI ITSEAIANWQ EFLEGLLKDI AKLMDFVFFY
TIFRTGEDKF ESFIFWRCKC EGYKKKVEED ILKSLKTSGI YVPGAKVDFQ HILLENSIEI
IDYEKIAKLS KNLILEKPLI GGSVGIGISF QASENEVKKM AVEALLATIL NIIGSIKAIN
KYTKELEYYA TRDPLTNLYN QRVFWELLEY EVERAKRHNY KFSLLVIDFD NFKLINDAYG
HTVGDNFLRR VAKIIEANFR NEDIIARYGG DEFVVIMPYT DAEQAFSASK RLLDDIDKFS
MEVNSGKYAK ATISIGAAVY PDHARAAKEL FVLADNLLYK MKEEGKNGIK LPSDEDLGVF
AQEFGKISFL LMETIDKKKV IPYFQPIIDI KTMKPYAYEV LMRIEDNGEI LSAYKFIEIA
ETLGLVYKLD YILIEKAIDT IVKHKLPDNI KIFFNLSPKS LIIGDFIDKV KSILTQYSFP
STRIVFEITE RDTIKNIEII KKFVQALKLE GFSFAIDDFG AGFASYAYIK HFPIDFVKID
GEIVRTMTSN KIDEAFIKST VTLTKALNMK TIAEFVENEE TLQALISAGI DFVQGYYVGK
PSKNLL
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