| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0553 |
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| Symbol | |
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| ID | 6743349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 488964 |
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| End bp | 490448 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642750344 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_002121218 |
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| Protein GI | 195952928 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00432944 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCATTC AAGAAAAAAT ACTTCATGCA ATAATCGTAA TGATAGGGGC CTTTATGGCT
ATTTTGGATA CCACAATAGT GGATGTCGCT TTGCCTAAAA TGATTGCGCC GTTACACACC
GATTTGTATG GTATTCAATG GGTAGTTACT GCTTATATGA TATCTTCTGC AGTGCTTTTA
CCTTTAATTG AGTATATAGA ATCCAAAGTT GGTTTAAAAA ATATGTTTGT AGCGGGTATT
GGGCTTTTCA CGGCTGCGAG CTACATGTGT GGTGTTTCCC ATAGGCTTGA TGAAATTGTT
TTATTTAGAA GTATTCAGGG GGCTGTGGAA GCTCTTATAA TGGTATCAGC TCAGGCAATA
CTGTTTAGTA TTTTTGAAAA CAAAGGCACG GCTATGGGTA TTTTTGGTCT TGGAGCTAGC
TTAGCCCCGG CTGCTGGCCC TACCATAGGT GGATGGCTTA CTCAACATAT AGGCTGGGAA
GCTATATTTT TTGTAAATGT TCCTGTGGGT ATTTTAAACA CATTTTTATC TATTTTCTTT
CTTAAAAACC TAAAAATTGG TAAAAAAATA GAAAGTTTTA ACCTGATAAG TCTTCTATTT
ATAAGTATAA GCACCATATC TTTGATAGTG CTTTTATCAA ACGGTCAGAA ATGGGGATGG
TTTAGTTCAA ACATTACTAT AGTTTTTTCC TATATAGCTT TGATAAGCTT TTTGCTTTAT
ATAGCAATAG ATGTATATTC TAAAAATAAG CTTATAGACC TTAGCGTATT TTCAAAAAGA
AACTTTCTTA TGGCATTTCT TGCATATTTA TGGGTACTTG GTTTTTCTAT GTATGCTGTT
TTTTATGCAT TACCTTTGTT TTTTGAAAAG TTAAAAGGAA TAGAGAGTTT TAAAACAGGT
CTCATGCTGC TTCCTTTTGC TATTTCTATA GCTGTTTTTT CGACTGTAGG GGGAGTATTG
AGCGATAAGA AAAATCCAAA GATCGTTCTT TTGGTATCAA CCGCTATATA TATTGGAAGT
CTTTATTTTT TCTTGTTAAA ATTTGATTAC TACACACCAA AATCAGTGGC AGAATTACAG
CTTATAATAG TTGGTGTTGG ACTTGGTTTA TTTTTCCCGC CGGTTACCGT TATCGCTTTA
TCTGGATTAG AAGAAAAAAT GCTTATAGTG ATTACCATTC TTGATTATAT AAGGTTTATA
GGGGGCTCTT TTGGTACAGC TATTGCTACA AATATATTAA ATACCAGAAC AGATTTTCAT
TTTGACAATA TAAGTTTTAT CCAAAGTTTT AATGCTTTTA AAATAAAAGA GTTTTTAAAT
TCCAATTATC TGTCAAAACC AATAAAAGAG GCTATTTTAT ACAAGGCTAT GGAATTACAG
GCTTTTTCGG AAGCTTTTCA AGATTTATTT TTCTGGTGTG TGGTGTTTGC CCTTATAGGG
GTGTTGTTTT TTGCCATTGA TTTTAAGATG AAGTTAAAAG CATAG
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| Protein sequence | MSIQEKILHA IIVMIGAFMA ILDTTIVDVA LPKMIAPLHT DLYGIQWVVT AYMISSAVLL
PLIEYIESKV GLKNMFVAGI GLFTAASYMC GVSHRLDEIV LFRSIQGAVE ALIMVSAQAI
LFSIFENKGT AMGIFGLGAS LAPAAGPTIG GWLTQHIGWE AIFFVNVPVG ILNTFLSIFF
LKNLKIGKKI ESFNLISLLF ISISTISLIV LLSNGQKWGW FSSNITIVFS YIALISFLLY
IAIDVYSKNK LIDLSVFSKR NFLMAFLAYL WVLGFSMYAV FYALPLFFEK LKGIESFKTG
LMLLPFAISI AVFSTVGGVL SDKKNPKIVL LVSTAIYIGS LYFFLLKFDY YTPKSVAELQ
LIIVGVGLGL FFPPVTVIAL SGLEEKMLIV ITILDYIRFI GGSFGTAIAT NILNTRTDFH
FDNISFIQSF NAFKIKEFLN SNYLSKPIKE AILYKAMELQ AFSEAFQDLF FWCVVFALIG
VLFFAIDFKM KLKA
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