| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0527 |
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| Symbol | |
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| ID | 6743323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 464315 |
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| End bp | 465523 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642750318 |
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| Product | type II secretion system protein |
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| Protein accession | YP_002121192 |
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| Protein GI | 195952902 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0779585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAAAT TTCAATATGT AGCTTATACA AAAGATGGCA AAGTAGAAAA AGGCGTTATA
GAAGCTCAAA ATCAAGATGT GATAGCTCAA ATATTGTCTT CCAAAGAACT TATTCCTGTA
TCTATAGAAC TTGCCAAAGA GAGAACTCCT TCTTTTTCCT TTGGTAAGAA AGTAAAAGAA
AAAGAATTAT CTTTAGTGTT GCGACAGGTT GGGTTTTTAA TTCAAGTAGG TATAAGTGTG
CCGCAAGCTT TGGAAATGGC AGCAAAACAA ATAGATAACA AATATTTTCA AGAAACACTT
TTAGAAGTTG CTAAAGATGT TAGTGAAGGG GTTACTGTAG GCCAAGCGAT GCAAAAGAAG
AAAAACGTTT TTCCGCCACT TCTTATAAGT TTAGTAATGA CAGGGGAAGA AACAGGACAA
CTTGACAGAT CACTAATCTT AGCTTCAGAA TATTATGAAA AATTAGCTAA GATAAAAGGT
AAAATAAAAA GTGCTTCTTT TTATCCCTCT TTTGTCCTTA TAATAGCCAC CATTATAACA
ACGGGTATTA TTTACTTTTT AGTACCAATA TTTGCTAGTA TATACAAAGG TTTTGGCGCA
TCGCTACCGC TTCCTACGTT AATGCTTTTA AAAGCTTCAA ATTTTTTACA TGAAAATATA
TTAAAGTTTA TAATTATTTT AATTATTTTA GGTTTTGTTT TTAAACGCCT TTATCAAAAT
AATATGGAGT TTAAAAAACG AATAGAAAAA ACGCTGTTAA AACTACCTGT TTTAGGCAAT
GTTTTCCATA AAATAATGAT GAACTCCTTT GCTACATCGT TATCGTCTTT GTTTTCTAGT
GGTGTATCTT TAGATAGATC TATGGAATTA ATATCTCAGA CTAGCACAAT GCAAATAGTA
AAAGAGGGGG TAGAAAAGGC TTCTAAATCT GTAAAAGAAG GAAAACCGCT ATGGCTATCT
TTAAAAGAGA CAGGGCTATT TGATGATCTC TTTATATCTA TGGTTAAAAT AGGCGAAGAC
ACTGGACGCC TTGATGATTT GTTACAAAGT ATCGTAAGGT TTTACGAAGA TGAAGTAGAT
AAAGCAATAG ATGCCATGAT ATCTTTGATA GAGCCTACTA TGATTGTAAT AATAGGAGGC
ATAATAGGTG TTATATTAAT AGCTCTATAT ATGCCAATAT TTAAAATTGG TTCGTTGATA
AAATCTTAA
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| Protein sequence | MPKFQYVAYT KDGKVEKGVI EAQNQDVIAQ ILSSKELIPV SIELAKERTP SFSFGKKVKE
KELSLVLRQV GFLIQVGISV PQALEMAAKQ IDNKYFQETL LEVAKDVSEG VTVGQAMQKK
KNVFPPLLIS LVMTGEETGQ LDRSLILASE YYEKLAKIKG KIKSASFYPS FVLIIATIIT
TGIIYFLVPI FASIYKGFGA SLPLPTLMLL KASNFLHENI LKFIIILIIL GFVFKRLYQN
NMEFKKRIEK TLLKLPVLGN VFHKIMMNSF ATSLSSLFSS GVSLDRSMEL ISQTSTMQIV
KEGVEKASKS VKEGKPLWLS LKETGLFDDL FISMVKIGED TGRLDDLLQS IVRFYEDEVD
KAIDAMISLI EPTMIVIIGG IIGVILIALY MPIFKIGSLI KS
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