| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0522 |
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| Symbol | |
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| ID | 6743318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 459282 |
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| End bp | 460544 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642750313 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_002121187 |
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| Protein GI | 195952897 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000495897 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAAAG ATTACAACAA GTATTTAGAT TACAAAGAAG ATAAGTTATT TTTAGAAAAT
GTGGATTTAG AAGAGCTGGC TAAAGAATTT GGGACACCTC TTTATGTGTA TTCGGCTTCT
TACATAAAAG ATAAAGCTAA AGCCTACAAA GAGGCGTTCA AAGATACCGA TTTTCACTAC
GCTTTGAAGG CAAATGGAAA TTTAAGCATT ATAAAGCTTT TAAAAGATGA GGGTTTTGGG
GCTGACATAG TTTCTGGTGG TGAGCTTAGA AAAGCTATAA AAGCCGGGAT AGAGGCTTCT
AAGATAGTTT ATGCAGGTGT TGGTAAAACT ATGGAAGAGT TAAAAGCTGC CGTTGAAGCC
GAGATTAAAA TGTTCAACGT AGAATCGTCG ATAGAACTCG ATATATTAAA CGATATAGCA
AAAAATCTTG GGAAAAAAGC CAACGTAGCA ATAAGAGTAA ATCCTGACGT AGACCCTAAA
ACCCATCCTT ATATATCCAC TGGTATGAAA AAAAGCAAAT TTGGAGTTGA TATAAAAACT
GCTTACAAAG AGTATCAGTA TGCTAAAAGC CTAAAACACC TTAATGTAAT AGGTATACAC
TGTCACATAG GTTCCCAGCT TTTGGATGTA TCACCCTATA TAGAAGCTTC TGAGAAAGTA
AGAGAGCTTT ACGACAAGCT TGTAAAAGAT GGGTTTGATA TTAAGTATAT AGATATGGGA
GGAGGCTTAG GTATAAAGTA TAAACCCGAA GAGCAGGAAC CACATCCTAA AGATTTAAAA
GAAGCTTTGT ATCCGGCTTT TAAAGATATA AAAGCAAGGC TTTGTTTAGA ACCCGGCAGA
TCGATGGTAG GCAACGCTGG TATCTTGATA ACAGAAGTGC AATTTTTAAA AGATAAAGGT
CATAAACATT TTGTAATAGT AGATGCTGGC ATGAATGACC TTATAAGGCC CTCCATATAC
GGGGCTTATC ACCATATAGT CCCTACTCAC AACAAATATA AAGAAGATTT TATTAAAACT
GATATAGTAG GACCAATATG TGAAACTGGA GACTTTTTAG CTCAAGACAG AGAAATACAT
AAAGTAGACA GAGGAGATTA TCTTGCAGTA TTAAGCGCCG GTGCTTACGG ATTTTCTATG
TCAAGCCATT ATAATATAAG GCCAAGAGCG GCAGAAGTGC TTATAGAAAA TGGGAAATAT
AGGCTTATAA GAAGCAGGGA AACTTACGAT TATATAGATT ACGATGAAGC TATTTTTTTA
TGA
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| Protein sequence | MLKDYNKYLD YKEDKLFLEN VDLEELAKEF GTPLYVYSAS YIKDKAKAYK EAFKDTDFHY
ALKANGNLSI IKLLKDEGFG ADIVSGGELR KAIKAGIEAS KIVYAGVGKT MEELKAAVEA
EIKMFNVESS IELDILNDIA KNLGKKANVA IRVNPDVDPK THPYISTGMK KSKFGVDIKT
AYKEYQYAKS LKHLNVIGIH CHIGSQLLDV SPYIEASEKV RELYDKLVKD GFDIKYIDMG
GGLGIKYKPE EQEPHPKDLK EALYPAFKDI KARLCLEPGR SMVGNAGILI TEVQFLKDKG
HKHFVIVDAG MNDLIRPSIY GAYHHIVPTH NKYKEDFIKT DIVGPICETG DFLAQDREIH
KVDRGDYLAV LSAGAYGFSM SSHYNIRPRA AEVLIENGKY RLIRSRETYD YIDYDEAIFL
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