Gene HY04AAS1_0518 details

Gene Information

• Locus tag: HY04AAS1_0518
• ID: 6743314
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Hydrogenobaculum sp. Y04AAS1
• Kingdom: Bacteria
• Replicon accession: NC_011126
• Strand: +
• Start bp: 455434
• End bp: 457344
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 642750309
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_002121183
• Protein GI: 195952893
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000475149
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCAGACAG CTAAGAATAT ACTTATTTGG TTTTTAATTA TAGGTTTTAT GATAGTAGCT 
TTTAACTTGT TTGAGGAAAA AGGTTCATCC TCACCAAGTG CAACCCCTAT GTCTTTAACA 
ACATTGGTTG ACATGGTAAA ACAAAACAAA ATAGGTGAGG CTGATATCAA AGGCGACAAG 
ATAATAGCTT ATACCAAAGA CGGCCAGAAA GTAGAAACCT ATATTCCAAA AGGTTATACA 
TCTATTATAG ATGAAATGAT AAAAGATGGA GTAAAGGTAA AAGCTTCACC ATCTAGCGGA 
GGAGATATAT CCTCCAGTGG AAACTGGCTT GTATCAATGC TAATATCTTG GTTTCCGGTA 
CTTTTGTTTG CTGGTATTTG GATTTTAATG ATGAGACAAA TGGGAAACGG TGGACCCACA 
AGAGCGTTCT CTTTTGGAAA ATCTAAAGCG AAAGTGTATA TAGAAGAAAA ACCAAACGTA 
AAGCTAGACA ATGTAGCTGG TATGGATGAA GTTAAAGAAG AAGTGGCTGA AGTTATAGAA 
TATTTAAAAG ACCCGGCAAG ATTTAGAAAA TTAGGTGGTA GACCTCCAAA GGGAATACTG 
TTTTATGGAG AACCAGGCGT TGGAAAGACA CTTTTAGCTA AGGCTCTTGC AGGAGAAGCA 
CACGTACCTT TCATATCGGT ATCTGGATCA GATTTTGTTG AGATGTTTGT AGGTGTAGGT 
GCCGCTAGAA TGAGAGATAC GTTTGAAACA GCTCGTAAAA ATGCCCCTTG TATAGTATTT 
ATAGATGAGA TTGATGCGGT AGGAAGAAGC AGAGGGGCTA TCAACCTAGG TGGTAACGAC 
GAAAGAGAAC AAACATTAAA CCAGCTTCTG GTAGAAATGG ATGGTTTTGA CACTTCTGAA 
GGTATACTCA TAATAGCAGC TACAAATAGA CCAGATATTT TAGATCCAGC TCTTCTAAGA 
CCAGGAAGGT TTGATAGACA AATATTTATT CCAAAGCCAG ATGTAAAAGG AAGATACGAG 
ATATTAAAAG TACACGCTAA AAATAAACCG CTTGCAAAGG ATGTAGATTT AGAGCTTATA 
GCAAGAGCAA CGCCCGGATT TACAGGAGCT GACCTTGAGA ACATATTAAA CGAAGCAGCG 
CTTTTGGCAG CTAGAAAAAG AAAAGATCTT ATACATATGG AGGATTTGGA AGAAGCTATA 
GATAGAGTTA TGATGGGGTT GGAAAGAAGA GGTATGGCCA TATCGCCAAA AGAAAAAGAA 
AAAATAGCTG TTCATGAAGC AGGACACGCT TTAATGGGGC TTATGATGCC AGACGCAGAT 
CCTCTTCACA AAGTTTCAAT TATACCAAGA GGTATGGCTT TGGGAGTGAC TACTCAGCTT 
CCAATAGACG ATAAGCATAT TTACGATAAA GCAGATCTTC TTTCAAGAAT ACATATACTT 
ATGGGTGGAA GATGTGCGGA GGAAGTGTTT TACGGTAAGG ATGGTATAAC TACAGGAGCA 
GAAAATGACC TACAAAGGGC TACCGATTTA GCTTACCGTA TAGTGGCTAC TTGGGGAATG 
AGCGAGAATG TAGGACCAAT ATCTGTAAGA AGAAATATCA ATCCTTTCCT TGGGGGTTCT 
ACAGTCACGG AAGGAAGCCC AGATCTTCTA AAAGAGATAG ACAAAGAAGT GCAAAAACTC 
CTAGCATCTG CTTACGAAGA AACAAAAAGA GTTATAGCCG AGAACAAAGA AGCTTTAAGC 
AGTGTGGTAA AAAGGCTAAT AGAAAAAGAA ACCATAGATT GTAAAGAATT TGTGGAGATA 
CTTAGTTTAC ATGGCGTTGA GGTAAAAAAT GCTTGTAAAC AAGAGGAATC TTTGGAGAAA 
AAAGAAAATA ATGTAGAGCC TAAAATTGAT AAAAATGTTG TTAACGTATG A 

 

Protein sequence

MQTAKNILIW FLIIGFMIVA FNLFEEKGSS SPSATPMSLT TLVDMVKQNK IGEADIKGDK 
IIAYTKDGQK VETYIPKGYT SIIDEMIKDG VKVKASPSSG GDISSSGNWL VSMLISWFPV 
LLFAGIWILM MRQMGNGGPT RAFSFGKSKA KVYIEEKPNV KLDNVAGMDE VKEEVAEVIE 
YLKDPARFRK LGGRPPKGIL FYGEPGVGKT LLAKALAGEA HVPFISVSGS DFVEMFVGVG 
AARMRDTFET ARKNAPCIVF IDEIDAVGRS RGAINLGGND EREQTLNQLL VEMDGFDTSE 
GILIIAATNR PDILDPALLR PGRFDRQIFI PKPDVKGRYE ILKVHAKNKP LAKDVDLELI 
ARATPGFTGA DLENILNEAA LLAARKRKDL IHMEDLEEAI DRVMMGLERR GMAISPKEKE 
KIAVHEAGHA LMGLMMPDAD PLHKVSIIPR GMALGVTTQL PIDDKHIYDK ADLLSRIHIL 
MGGRCAEEVF YGKDGITTGA ENDLQRATDL AYRIVATWGM SENVGPISVR RNINPFLGGS 
TVTEGSPDLL KEIDKEVQKL LASAYEETKR VIAENKEALS SVVKRLIEKE TIDCKEFVEI 
LSLHGVEVKN ACKQEESLEK KENNVEPKID KNVVNV