Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0505 |
Symbol | |
ID | 6743301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | + |
Start bp | 443893 |
End bp | 444966 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642750296 |
Product | riboflavin biosynthesis protein RibD |
Protein accession | YP_002121170 |
Protein GI | 195952880 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0117] Pyrimidine deaminase [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAATA AAGATAAATA TTACATGAAA CTAGCTTTGG AAGAAGCATA CAAATACAAG GGCCAAACCC ATCCAAACCC TGCAGTAGGA GTACTTATAG TAAAAGACGA CAAGATTTTA TCAATAGGGG CCCATAAAAA AGCAGGTACT GATCACGCTG AGATCGTAGC TTTAAAAAAT GCCCAAGAAG ATGTAAAAGG AGCTACGATG TATGTAACTT TAGAGCCTTG CTCATTTCAT GGTAAAACAC CCCCATGCTG TCCTGCTATA ATCTCAAGCG GTATAAAAAA AGTTGTTATA GGCTCAGTGG ACCCAAATCC AAAAGTCTCT GGAAAAGGCA TAGAGTGGCT AAAATCTGCT GGTATTGAAG TAGAAGTAGG TGTATTAAAA GAAGAATGTG ATAAGTTAAA TGAGGATTTT TTTGTTTATA TAACCCAAAA AAGACCTTTT ATAACCCTAA AATGCGCTAT GTCTTTGGAC GGAAAACTTG CTAAAGAAAA CAAAGATAGC AAATGGATTA GCTCAGAAAA AGCAAGGAAA ATATCTCATA TATATAGAAA GTACTCAAGC GCAATATTAG TGGGCATAAA CACCATCTTA AAAGATAACC CAAAACTTAC CGTAAGGCTT GAAGGAAATG AATATCAGCC CTACAGCGTT GTGATAGACC CAAACTTAGA CATTCCCTAC GATGCAAACA TATTTAAAAA AGGATATGAA AACATCATTA TTATAGTTTC TACAAAAACC GATGATAAAA AGAAAGAATA CCTTAAATCC CTTGGTGTTA GGCTTTTAGA ATTAGAAAGT TTTGATATAA AATCTATATT AAAAGCTCTA TACGAGATAG ATATAATGCA CATTTTTGTA GAAGGAGGAG CTTATACAAT ATCAAGATTT TTAGAAGAAA ATATGTGGGA TAAGATGCTT ATATTTAGAG GTTATAAATT TATAGGAAAA GGTATAGGTC TTGATTTTTA TAGTGATTTT TCAAAGATAT ACAAAGGAAG TCTTCAAATT ATCGACGATA CCACAGATTT GTTGGAAATT TACAATGGAT ATATCACTGT TTGA
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Protein sequence | MINKDKYYMK LALEEAYKYK GQTHPNPAVG VLIVKDDKIL SIGAHKKAGT DHAEIVALKN AQEDVKGATM YVTLEPCSFH GKTPPCCPAI ISSGIKKVVI GSVDPNPKVS GKGIEWLKSA GIEVEVGVLK EECDKLNEDF FVYITQKRPF ITLKCAMSLD GKLAKENKDS KWISSEKARK ISHIYRKYSS AILVGINTIL KDNPKLTVRL EGNEYQPYSV VIDPNLDIPY DANIFKKGYE NIIIIVSTKT DDKKKEYLKS LGVRLLELES FDIKSILKAL YEIDIMHIFV EGGAYTISRF LEENMWDKML IFRGYKFIGK GIGLDFYSDF SKIYKGSLQI IDDTTDLLEI YNGYITV
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