| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0484 |
|---|
| Symbol | |
|---|
| ID | 6743278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | - |
|---|
| Start bp | 422088 |
|---|
| End bp | 425534 |
|---|
| Gene Length | 3447 bp |
|---|
| Protein Length | 1148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 642750275 |
|---|
| Product | chromosome segregation protein SMC |
|---|
| Protein accession | YP_002121150 |
|---|
| Protein GI | 195952860 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1196] Chromosome segregation ATPases |
|---|
| TIGRFAM ID | [TIGR02169] chromosome segregation protein SMC, primarily archaeal type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATG CCTACATAGA AAAAATTGTA GTTACAAACT TTAAATCCTA TGGCACAGAA
AAACTAGAAA TACCAATAGG AGAGGGCTTT ATAGGGATAG TGGGGCCAAA CGGAGCTGGA
AAATCAAACA TAGGTGATGC TATATCCTTT GGTCTTGGGC TTTCCACATC AAAAACCATG
CGGGCTAAAA ACCTCACACA CCTTATATAT TCAAAACAAG GTCAAAGAGA AGATTTTGCA
CAGGTGGATA TACACTTTTC AAACCCACAA ATATTTGGAT ACGATGAGTT TGTAGTTACA
AGGATTATCT ATAAAGATGG TAAAAGCGTA TATAAACTAA ACGGCAAAAT TATAAGAGAA
AAAGATTTGC ATCTAATACT TGCAAGAGGT GGCATATACA AAGAAGGCTA CAACATAGTA
TTACAAGGAG ATATAGTAAA ATTTGTAAAA ATAACACCTT TAGAGCGAAG AAAAATCATA
GAGGATGTAG CAGGTATAAG CGAATACGAG CAAAAAAGAC AGTTTGCTTT AGAAGAACTA
GGAGAGGCTG ATATAAAAAT AAGAGAGTTA AAACCACTTG TAGAAGAATT AGAGGCAAAT
TTAGAAAAAT TTGAGAAAGA AAAAGAAAGG CTTCATCAAT ACAAAGCTTT GATGGAGAAA
AAACATATAC TTGAGTGTGT TTTGCTTTTA AAAGAAAAAC AAAGCCTTCT AAAGGACTTG
CAAAAAACTT CCGAGGAAAA AGAAGCTTTA GAGACTAAAA GCTCAAAACT TTTAGAAACC
ATAGATATTA AAACCAAAGA ACTAAAGGAT GTAGAACAAA AAATCACAAA CTTACAAGAA
ACCCTTCTTC CTTACAGAGA ATCTTCTGGT AAGCTATCGG CAAAGATAGA ATACATAAAA
GAGCAAAAAG CCTCGAAAGA GCAAGAACTA AAAAAAGAGC TATCCCATAA AGAAGATATT
GAAAAAAAGA TTGATTTTCT TGAAAAAGAT TTGCTTAGTT TAGAAAAAGA GCTTTTAGGG
ATAGAACAAG AAAAATTATC AAAAGAAAAA GAGTTTTATA GCATAGAAGA GCTTATAAAA
GAAAAAGAAA AAGAACTAAA ATCCACCGAA GAAAAGCTAA ATCTATCACC AGAGGAGATA
GAACAGATAG AGAAAAAAGA AAAAGAGTTA AAGTCCATTT TAGAACAAAA GAAAAAACAA
TACCAGCAAT ATATAGACCA AATCCAAGAT ATATCCCAAA AACAAAATAG ATACAAAGAC
GACATACAAA GACTAAAAGC CGATTTACAA GCGTTAGAAC AAAAAGATTT TGTTGAAGAA
AAACTAAAAA CATTCCAAAA AAATATAGAA GAGGCAAGGC TTTCTATAGA AGCGATACAG
CAAACTATAG CCAAATATAC AAGTTCCTTG ACAGAAACAA AGAAAGAAAT AGAGCAAATC
ATATCAGAAA AAGCAAGAAT AGAGTCTCAG CTTAGATACA ATGAGGATGA TACTTATATA
TTCCAAAATA TAAAAGGCGT TTATGGTAAA GTAGAAGATC TTATAAGCTT AAAAGATGAA
GAATACAAAA CAGCTATAGA AGCTGCGGCT GGGGCTAGGC TTTCTTATGT GGTTGTGGAA
TCTGAGGAAA TAGCAAAAAC TTGTATTGAG CTTTTAAAAA AGAACTCTGA TAAAAGAGTA
AGCTTTATAC CGCTAAACCG TATAAAAACC CAAAGTTTAC CACCTTATCC AAGACAGCGC
GGATATATAG ACTTTGCAGT AAAGCTTGTT GATTACGATA AAGCGTTAGA GCCTGCCATA
AGCTTTGTTT TTGGCGATAC TCTTGTGGTA GAGAGCTTTG ATGTGGCTAA AAGCCTACAA
AACTATAGAT GTGTAACATT AGAAGGAGAA GTATTTGAAA AATCTGGTGT TATAACAGGG
GGAAAAGCAA AACAACACTC AAACATCGGC AAAAAAGCCC TTTTAGAAAA ACTAGAATTT
TTAAACGAAA AATATAACCT CTTAAAAGCA AAAGAACAAC AGCTAGACCA AAATATCGGT
AAAGCAAAGT CTTCGCTCAT AGAAAAAGAA GGTGTAATAG CAATAAATAC AAAGTATATC
AAAGATTTGG AAAATCAAAA AAAAGATACG CTCTTACAAA AATCAAATAT ATTAGAGCGT
ATAAAATCTG GTGAAGAATA CATAGAGCAC TTAGAAAACA AGAAAAAAGA GCTATTAGAG
ATGTTAGAAC CTTTGAAAGA GGAGATAAAA TATATAGAAG AAAAGCTTAC AAACCTAGAA
CTTAGAAAAA AAGATATACT TTCATACTAT ACTAGCAAAG AGATAAAAGA GCTTAAAGAT
ACTATAGAAT ATTACAAAAA GCTTCATTTA GACAAAACAA AAGAACTAAA CACCATAGAA
CTAAAGAAAA ATGACATCTC AAAAAATATA GAATATGTAA AATCCTCTGT AGACCAAAAA
AAGCAAGAAC TTATTGGAGC TCATTCTCAA ATAAAGAGTT TAGAACAAGA GCTAACGTCT
TTAGATCTTG AACTAAAAAG CGCAGAAGAA GAGTTGAAAG AATCAAATGC AATGTTTTAT
AAGCTTTACG AAGAGAAAGA GCTTTTAGAG AAAGAGCAAA AAAATTTACA ATCAGAACTA
GGTGGTCTTA AGCTAGAGCA CGAGAGACTT TTGGAGGAGA TTGGCTCTTT ATCAAACGAC
ATCACAAGAA TTCAAACAAA GATAGAATCT ATAAACGAAG CTCTAAAAGA AAAGGAGTAC
GACGGTACCA TCTACGAAGA GCAAAACCAA AGCGCTTCAA AATTAAAAGA AGAACTAGAA
CGTACCAAAA AACTTTTGGA GAGTATGAGC GATATAAATC TAAAAGCCGA AGAAGAATAC
GAAGAAACCC TAAACAGATT AAAAGACTAC AAAGAAAAAT TAGATCAACT CATAAAAGAC
AAGCAAGCGA TAAAGGCTAT GATAGAGGAG ATAGATAGAA AAAAGTACAG CGCTTTTATG
GAGGCTTTTA ACAACATAAG AAAAAATTTC AAAGAAATAT ACGCTAAAGT ATCTTATCAA
GGAAAAGCGG ATTTATCTTT GGACAACGAA GAGGACCCAT TTTCTGGTGG TGTTTCTATA
TTTGTAAAAC CAAGAGGAAA AGATGTGCAG TACGTAGAGG CGATGTCTGG TGGAGAGCAA
ACGCTGGCGG CAATGTCTTT GATCTTTGCC ATACAAGAGT ATAAACCATC GGTGTTTTAT
TACTTTGATG AGATAGATGC TCATTTAGAC GAGGCAAATG CCTATCTTCT TGGTCAGATG
ATAAAAGAAA AATCAAAAAA TGTGCAGTTT ATAGTGGTAA CCCTCAGAGA AAACCTGGCA
AACTTTGCAG ATAAGCTTAT AGGAGTAACC AACAAAGACG GTATTTCAAA AACCCTTACC
TTCAAATCTT TAAAAGAGGT ATCTTAA
|
|---|
| Protein sequence | MENAYIEKIV VTNFKSYGTE KLEIPIGEGF IGIVGPNGAG KSNIGDAISF GLGLSTSKTM
RAKNLTHLIY SKQGQREDFA QVDIHFSNPQ IFGYDEFVVT RIIYKDGKSV YKLNGKIIRE
KDLHLILARG GIYKEGYNIV LQGDIVKFVK ITPLERRKII EDVAGISEYE QKRQFALEEL
GEADIKIREL KPLVEELEAN LEKFEKEKER LHQYKALMEK KHILECVLLL KEKQSLLKDL
QKTSEEKEAL ETKSSKLLET IDIKTKELKD VEQKITNLQE TLLPYRESSG KLSAKIEYIK
EQKASKEQEL KKELSHKEDI EKKIDFLEKD LLSLEKELLG IEQEKLSKEK EFYSIEELIK
EKEKELKSTE EKLNLSPEEI EQIEKKEKEL KSILEQKKKQ YQQYIDQIQD ISQKQNRYKD
DIQRLKADLQ ALEQKDFVEE KLKTFQKNIE EARLSIEAIQ QTIAKYTSSL TETKKEIEQI
ISEKARIESQ LRYNEDDTYI FQNIKGVYGK VEDLISLKDE EYKTAIEAAA GARLSYVVVE
SEEIAKTCIE LLKKNSDKRV SFIPLNRIKT QSLPPYPRQR GYIDFAVKLV DYDKALEPAI
SFVFGDTLVV ESFDVAKSLQ NYRCVTLEGE VFEKSGVITG GKAKQHSNIG KKALLEKLEF
LNEKYNLLKA KEQQLDQNIG KAKSSLIEKE GVIAINTKYI KDLENQKKDT LLQKSNILER
IKSGEEYIEH LENKKKELLE MLEPLKEEIK YIEEKLTNLE LRKKDILSYY TSKEIKELKD
TIEYYKKLHL DKTKELNTIE LKKNDISKNI EYVKSSVDQK KQELIGAHSQ IKSLEQELTS
LDLELKSAEE ELKESNAMFY KLYEEKELLE KEQKNLQSEL GGLKLEHERL LEEIGSLSND
ITRIQTKIES INEALKEKEY DGTIYEEQNQ SASKLKEELE RTKKLLESMS DINLKAEEEY
EETLNRLKDY KEKLDQLIKD KQAIKAMIEE IDRKKYSAFM EAFNNIRKNF KEIYAKVSYQ
GKADLSLDNE EDPFSGGVSI FVKPRGKDVQ YVEAMSGGEQ TLAAMSLIFA IQEYKPSVFY
YFDEIDAHLD EANAYLLGQM IKEKSKNVQF IVVTLRENLA NFADKLIGVT NKDGISKTLT
FKSLKEVS
|
|---|
| |