Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0462 |
Symbol | |
ID | 6743256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 401303 |
End bp | 401818 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642750255 |
Product | translation initiation factor IF-3 |
Protein accession | YP_002121130 |
Protein GI | 195952840 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00239024 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAAGAGT ATAGAGTAAA CGAAAAGATC ACAGCAAGAG AGGTAAGGCT AATAGACGAG AACGGAAATC AAATAGGCAT AGTACCAATA GGAGAAGCTC TTGAAGCTGC AAACAGAAAA GGCCTTGACC TTGTGGAAAT AGCACCGCAG GCAAATCCAC CGGTATGTAA GATTTTAAAC TACAGCAAGT TTAAGTATGA GATTCAAAAA AAAGAAAAAG AAGCTAAGAA AAAACAAAAA GAATCTGCTA TAAATGTAAA AGATATAAAC CTTAAAGTGA TGATAGACAA TCACGATTTA GCTATCAAAA TTAAACAGAT GAGAGAGTTT TTAGAAGATG GAGACAAAGT AAGAGTGCGT ATAAGGTTTA GAGGAAGAGA AAACATATAC CCAGAGCTTG GTAACAAGCT TGTGGATAAA ATTATAAACG AGTTAGCGGA TGTTGGTGTT TTGGAAAAGC CTCCTCTAAA AGAAAACGCA TTCTTGACCT TTACATTGCT TCCTAAGAAA AAATAA
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Protein sequence | MQEYRVNEKI TAREVRLIDE NGNQIGIVPI GEALEAANRK GLDLVEIAPQ ANPPVCKILN YSKFKYEIQK KEKEAKKKQK ESAINVKDIN LKVMIDNHDL AIKIKQMREF LEDGDKVRVR IRFRGRENIY PELGNKLVDK IINELADVGV LEKPPLKENA FLTFTLLPKK K
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