| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0444 |
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| Symbol | |
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| ID | 6743238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 387461 |
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| End bp | 390007 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 642750237 |
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| Product | penicillin-binding protein, 1A family |
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| Protein accession | YP_002121112 |
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| Protein GI | 195952822 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0671851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA TACTTTCTTT TTTAGGTTTT TTTATAGTTG TTGTATTTGT GCTTTTAGGA
GTATATGTTT ATAGCGTAAG TATTGGGCTT CCGGACGTGA GAGCCTTAGA GAATTGGCAT
CCACCAGAAG CGTCAATGGT GTACGACTCA AACGGTAAAC TTATAGGTAC GATAGGAGCT
CAGAATAGGA TTTATGTAAC AATAGACAAA ATACCTAAAA TAGTTCAAGA TGCTTTTGTT
TCTGCTGAAG ATAAGACTTT TTATCACAAC ATAGGAATAG ACCCAACAAG TATAATAAGG
GCTTTAATAG TAGATTTAGA AAAGGGAAAG GCTGTAGAAG GCGGAAGCAC TATAACCCAG
CAACTGGCGA AAAACCTTTT CCTTACCCCT AAGAAGACAA TATCTAGGAA GATAAAAGAA
GCAATCCTTG CCATAGAGAT AACCCATACT TTTCCCAAAA GCAAAATACT TGAAATGTAT
CTCAACCAGA TATATTTGGG GCATGGTGCC TTTGGTGTAG AAGCTGCATC GGAAACTTAC
TTTGGTAAAC ACGTTTGGCA ACTGGGCCTT GACGAAGCTG CTCTTTTGGC TGGGCTTCCT
AGGGCTCCTA CAAAGTATGA TCCATATATA AATCCAAACT TGGCTCTTCA GAGAAGAAAC
TACGTTTTGT ATAGAATGTA TAAAGATGGC TATATTACGA AAGAAGAGTA CCTTAAAGCC
TCTCAGAAAC CTATTGTTTT AAACAAACAT ACAAACCCCA TCACCAATAG CGATTATTTC
GTTAGTTTTT TAAAAGATTA TATGTATAGA AATTTTCCCG ATCTTATTTA TCAAGGTGGA
TTAAAAATTT ATACCACTTT AAATGAAACG CTTCAGCAAG CAGCGGAAAA TGCTGTTAGA
AACCAAATAT TGTATATATC TAAACTAGAA CATTATCCAG TTCTACCTTG GTCTATTACC
GATACTATAG CAAAATTTAA GGCTCAAAAA ATAGATCTTA AGAAATCCAG GTATTATATA
GGTTTTGTTA AAAGCATAAA AAATAATCAG GCAAATATAG ATATAAACGG CACAGAGGTC
ACCGCTAAAA TTTTCCCCGG TATAAACGCT GGCGAGTACG TAATGGTAGA ACTTTCACGC
CCCACAAGTA TGCCACGATC TACAAGTATG CCACGATCTA CAAGTATGCC ACGATCTACA
AGTATGCCAC GATCTACAAG TATGCCACGA TCTACAAGTA TGCCACGATC TACAAGTATG
CCACGCCCCA ATAACGGATT TAATGCAAAG ATAATACCGC AGCTTCAATC GGCTTTGGTT
AGCATGAACG TACATAATGG TGCTATATTG GCTTTGGTGG GTGGATACTC TTATCAGCTT
TCTTCTTACA ATAGAGCAGT TTATGCTTTA AGACAGACTG GTTCTGCTAT AAAACCTATA
GTTTACCTAT CAGCCTTGAT GAAAGGCTAT ACTCAGATAA CCGAGATAGA CGCTACGCCT
CATGCTTATA AAGATCCATC TGCCCCGGGT GGATTTTGGA CACCTAGAAA TTATGAGGGA
GAGAGTTTTA CTACAATTAC CTTAAGAAAA GCTTTGGCTT ACAGCGTTAA TACTGCGAGC
GTAAATCTTT TGGCTCAGGT GGGTTTTGAT CTACCAATAT CTTTAGCAGC AAGGGTGGGT
ATAAAACTTC CTCCATATTA TTCTATGGTG CTTGGTAGTA CAAGCGTTAC TCCGCTTCAA
CTTACAAACA TGTTTCAAGC TTTCGCCAAC TTAGGGACTT ACTGTGAACC GTATTTTATA
ACAAAGATAG TAAACTCTCA AAACCAAGTG GTATATACAG GTCATCCAGT TTGCTACAAC
GTATTCCCAG CTCCTTACGA TAGAGTCTTG ATATCTATGT TAGAATATGT GGTAAAAGTT
GGGACTGGCT ATGCTGCCCA TGTGTTGGGA CCTTATATAG CTGGTAAGAC AGGTACTACA
AACCATTACG ACGATGCTTG GTTTGAGGGC TTTTCCTCTG ATGTGGTGAC TGGTGTTTGG
ACTGGGTTTG ATATAAGAAA AAGAATAGGC TACAATATGG CTGGTGCTGC AGCATCGCTT
CCTACTTGGA TAAACTATAT GAAAGAAGCA CTAAGCATAT ATCCGGAAAA GCCGTTTCCT
TTGCCAGATG GGGTAGAGTA TGTGGATATA GACCCAAAAA CCTACTTAAG GGCTACCCCT
TCTTGTCCTG GAGAACCTAT ACTTTTTGTA AAAGGTACAG CACCAAAAAC AACTTGTCAA
AACGTTTCCT TGCCGGTTCT TCAAAGTTTA AACCCAAATC AACCGCAAAG CCCCGGAAGT
CCTTTGCAGC CTTTAAACAA CACTCCCTCA TCATCTCAAC AACAGTCGTC TCAAGGCACT
ATATCACCTA CCAAGCCTCC CGCAAACCCT AATTCAAAAA ATCCAAATGG CGTATTACCT
AAAATAATAC AAGAGATAAA CAAAGAAACT TATCAAATAG ATAATGAAAC GAAAAATATA
AATAAGGAGT TAAACAATGC TCGCTAA
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| Protein sequence | MKNILSFLGF FIVVVFVLLG VYVYSVSIGL PDVRALENWH PPEASMVYDS NGKLIGTIGA
QNRIYVTIDK IPKIVQDAFV SAEDKTFYHN IGIDPTSIIR ALIVDLEKGK AVEGGSTITQ
QLAKNLFLTP KKTISRKIKE AILAIEITHT FPKSKILEMY LNQIYLGHGA FGVEAASETY
FGKHVWQLGL DEAALLAGLP RAPTKYDPYI NPNLALQRRN YVLYRMYKDG YITKEEYLKA
SQKPIVLNKH TNPITNSDYF VSFLKDYMYR NFPDLIYQGG LKIYTTLNET LQQAAENAVR
NQILYISKLE HYPVLPWSIT DTIAKFKAQK IDLKKSRYYI GFVKSIKNNQ ANIDINGTEV
TAKIFPGINA GEYVMVELSR PTSMPRSTSM PRSTSMPRST SMPRSTSMPR STSMPRSTSM
PRPNNGFNAK IIPQLQSALV SMNVHNGAIL ALVGGYSYQL SSYNRAVYAL RQTGSAIKPI
VYLSALMKGY TQITEIDATP HAYKDPSAPG GFWTPRNYEG ESFTTITLRK ALAYSVNTAS
VNLLAQVGFD LPISLAARVG IKLPPYYSMV LGSTSVTPLQ LTNMFQAFAN LGTYCEPYFI
TKIVNSQNQV VYTGHPVCYN VFPAPYDRVL ISMLEYVVKV GTGYAAHVLG PYIAGKTGTT
NHYDDAWFEG FSSDVVTGVW TGFDIRKRIG YNMAGAAASL PTWINYMKEA LSIYPEKPFP
LPDGVEYVDI DPKTYLRATP SCPGEPILFV KGTAPKTTCQ NVSLPVLQSL NPNQPQSPGS
PLQPLNNTPS SSQQQSSQGT ISPTKPPANP NSKNPNGVLP KIIQEINKET YQIDNETKNI
NKELNNAR
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