| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0435 |
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| Symbol | |
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| ID | 6743229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 379927 |
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| End bp | 381300 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642750228 |
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| Product | tRNA (uracil-5-)-methyltransferase Gid |
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| Protein accession | YP_002121103 |
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| Protein GI | 195952813 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
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| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAA ACGTCATAGG AGCAGGGCTT GCTGGTTCAG AAGCGGCTTA TTTTTTAGCA
AACAAAGGTA TAAAAGTTAG AATGTTTGAA ATGAGACCAA TAACATCGCA TTTTACTTCT
CGGCAAGATG AAAAAACAGG AACACACGAT GTAAGAAATG CTACGCAAAC TAGACCAATA
ACTACTACAG AGGCTCACAA AACGGATAAA TTTGGAGAGC TTGTTTGTAG CAACACCCTT
GGAAGTTTTG AAATAACCAC TGGGGCAGGC CTTCTAAAAA AAGAGATGGA ACTTTTAAAC
TCCCTTGTTA TAAAAGCTGC AAAACACTCT TATGTCAAAG CCGGAAGCGC TTTGGCGGTA
GATAGAAACG AGTTTTCAGA TTTTATAACA AAAACGATAT TGTCTCATCC AAATATAGAA
GTTGTAAGAG AAGAAGTAGA AAGCCTAAAT GAAAACGAGC TAAACATAGT AGCCACAGGG
CCTCTTACTT CAGAAAAGTT TTCAAAATAC TTAAAGAATC TTATAACAGA TGATTATCTT
TACTTTTACG ATGCGATAGC TCCAATCGTA GAAGCTTCAA GCGTTGACTT TTCAAAGGGA
TTTTGGGGTT CTAGATATGA CAAAGGAGAT GATTATTTTA ACTGTACGAT GACCAAAGAA
GAGTACGATA TATTTTATAA TGAGCTTTTA AAAGCAGAAA AAGTACCAAC CAAAGATTTT
GAAAGAGTGG TGCACTTTGA AGGATGTCTT CCCATAGAAG AGATAGCATC AAGGGGTTAT
GAAACACTTG TTTTTGGACC AATGAGCCCA AAAGGTCTAA AACACCACAT ATCAAAAGAC
GTATATGCAA TAGTACAGCT AAGAAAAGAA ACAAAAGAAG GAGAAGCCCT TTCTTTGGTG
GGATTTCAAA CAAAACTTAC CTATAAAGAA CAAGTAAGAG TGTTCAGGCT TATACCTTGC
CTTAGAAATG CTGTTTTCTC AAGGCTTGGC TCGATGCATA GAAACACATT CTTACAATCC
AACAAACTTT TAAAACCAAC TCTTGAATTA AGAAAAAATC CAAACATACT TTTTGCAGGA
CAAATAACCG GTGTTGAAGG CTACTCAGCT TCCGCTGCCA CTGGTATTAT AGCAGGTATA
AACGCATGGT TAAAATTAGA AGGCAAAGAA CCTACAACAC CACCAAAAAC CACCATGTTA
GGAGCACTCT TAGACTACAT AAGCTCCAAA GAAGGAGAGC TTCAACCTAT GAATCCAGTT
TTTGGGCTTT TACCAGATAT AGAGGTTCAC AAAAAGCATA AAAAATTATT AAAAGCTTAC
AGAGCACTTT TTGATATGAA AAAGTTTATA GAGCATCACA AGATATATGA TTGA
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| Protein sequence | MKVNVIGAGL AGSEAAYFLA NKGIKVRMFE MRPITSHFTS RQDEKTGTHD VRNATQTRPI
TTTEAHKTDK FGELVCSNTL GSFEITTGAG LLKKEMELLN SLVIKAAKHS YVKAGSALAV
DRNEFSDFIT KTILSHPNIE VVREEVESLN ENELNIVATG PLTSEKFSKY LKNLITDDYL
YFYDAIAPIV EASSVDFSKG FWGSRYDKGD DYFNCTMTKE EYDIFYNELL KAEKVPTKDF
ERVVHFEGCL PIEEIASRGY ETLVFGPMSP KGLKHHISKD VYAIVQLRKE TKEGEALSLV
GFQTKLTYKE QVRVFRLIPC LRNAVFSRLG SMHRNTFLQS NKLLKPTLEL RKNPNILFAG
QITGVEGYSA SAATGIIAGI NAWLKLEGKE PTTPPKTTML GALLDYISSK EGELQPMNPV
FGLLPDIEVH KKHKKLLKAY RALFDMKKFI EHHKIYD
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