| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0405 |
|---|
| Symbol | |
|---|
| ID | 6743199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | - |
|---|
| Start bp | 351942 |
|---|
| End bp | 352979 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 642750198 |
|---|
| Product | thiamine biosynthesis protein |
|---|
| Protein accession | YP_002121073 |
|---|
| Protein GI | 195952783 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCATA AACCAAAAGC GCTTGTTCTA TTTTCTGGTG GGCTGGACAG TCAGCTCGCC
GCAGTGAATA TTAGTAAAAT TCAAGGTATA GAAGTAAAGC TTATTCATTT CTACACTGGT
TTTTGTATAA CAGAGCATAA AAGAAGATTG GGTATTCCCA ACAAAGATGG CAAAATACCT
CAAAACCCAG CTTTAAAAGC GGCTGCAGAT TTAGAATTAC CTATAGAAAT AATAGATATC
TCTCAAGAGT ATATAAATGT AATTTTAAAC CCAAAATTTG GCTACGGCAA AAATATTAAT
CCATGTCTTG ATTGTAGAAT TTTTATGCTT TTAAAATTAA AAGAAATAAT GGAAAAAGAA
AATTATGATT TTATAGCCAC CGGCGAAGTA CTGGGACAAA GACCAATGTC TCAAACAAAA
GATAAACTTT TTATAATAGA AAAAGAATCA GGTCTTAAAG GCCTAATAGT AAGACCCTTG
TCTGCTAAGC TTTTGCCAGA AACAATACCA GAAGAAAAAG GTCTAATAAA AAGAGAACTA
ATGTGGGATA TATCAGGACG CTCAAGAACA AAGCAGATAA ATTTAGCAAA AACCTACAAC
ATAGATTACG AGCAACCATC TGGAGGATGC TGCTACCTTA CCGATGAGCA CTTTGCAATA
AAGTTTAAAG AAGAGTTAAG CTTTAAAAAA TCTCTAAATT GGGACGATTT AAGTCTTATG
ACAGTAGGAA GACACCTAAG ATTACCAAAT GGGACTAAGA TGATCATTTC AAGAAACGAA
GGCGAGACGA GGTTTCTAAG TGGTTTTAAA AATAGGTTTG ACTGGGCTTA TGTAGAAAAT
AAAGCTATTG CCATATTAAA AGATTTAAAC GAAGAAGATA TAGATTATAT AGCAAGGATA
ATGGCAAGAT ACTGTGGCAA CAAACCTACA TATGTAAACA TATCAATAGA TAAAAATATG
ATAAAAAAAA TTGCAGAGCC TTTAGAAGAT GATATAATAA ATTCCCTTAA GATAGGAGCG
GAAAGCTATG CTAGATGA
|
|---|
| Protein sequence | MSHKPKALVL FSGGLDSQLA AVNISKIQGI EVKLIHFYTG FCITEHKRRL GIPNKDGKIP
QNPALKAAAD LELPIEIIDI SQEYINVILN PKFGYGKNIN PCLDCRIFML LKLKEIMEKE
NYDFIATGEV LGQRPMSQTK DKLFIIEKES GLKGLIVRPL SAKLLPETIP EEKGLIKREL
MWDISGRSRT KQINLAKTYN IDYEQPSGGC CYLTDEHFAI KFKEELSFKK SLNWDDLSLM
TVGRHLRLPN GTKMIISRNE GETRFLSGFK NRFDWAYVEN KAIAILKDLN EEDIDYIARI
MARYCGNKPT YVNISIDKNM IKKIAEPLED DIINSLKIGA ESYAR
|
|---|
| |