Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0401 |
Symbol | |
ID | 6743195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | + |
Start bp | 350385 |
End bp | 351209 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642750194 |
Product | TonB family protein |
Protein accession | YP_002121069 |
Protein GI | 195952779 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.236004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACCAC GTCTTAAAAG TCGCCAAAAA GAGTATTTTA TTTTAGGTAT TTTGATTTCT TTACTACTTC ATATTTGGCT TTTAATAGCT TTTATCCATA TGAAAACCAA AAAACCAAAG AAAAATAAGC CAATAGAGAT AACACTAGTA CAAAAAGGTG TACCAAACAA AGCTATAGTC CCGCCTGCTA TACCAATGCC GCCATTCCCC ACACGTAAAC CCTCAAAGCC TCATCGCGTT TCAAAACCAT CAATAAAACC ATCAACTCGT AACCATGTTA ATAGACCCTC TACTCAAAAG TACGAAGCGC TTCCTTCTCG TATTTTAAAC TCTTTGCCAA AAAGTAGCTA CAAACCCTAT ATTGAATCTG AATCAAAGTC AACAGCTTCT TCACCAGTAC CATCTTCCAA ACCAAACACA AAGACATCTT TACCTTCTAC TCCCATAGCA AAAGAAGGAC AAAAACACTA CAATGCAAAG GCGAATCTAA ATTTAAACAT AAAACAATTT GTAAAGAAAG AAGAAAGCGT TTATCAATAT CTTAGCTGGC TTATTAGGTA TCTTAATAAA CAGGCTAGAG AAAGAGATTT GTATCCTAAA GAAGCTAAAA AACTTGGTAT AAAGGGTGAG GTGGTGGTAC GGGTTACTAT AAACAAAAAT GGGACAATAG ATATGTCTTC TTTAAGAGTT GTGCAATCAA GCGGTTACAA GATTTTGGAC GAAAGTGCAC CAAAAATTAT ATACGAACTT TCTCCTTTTA GAAAACCGCC AAAGAAGATA ACAATTAATT TACCTGTGTA TTTCTTAATA AACGGCTATT ATTAA
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Protein sequence | MTPRLKSRQK EYFILGILIS LLLHIWLLIA FIHMKTKKPK KNKPIEITLV QKGVPNKAIV PPAIPMPPFP TRKPSKPHRV SKPSIKPSTR NHVNRPSTQK YEALPSRILN SLPKSSYKPY IESESKSTAS SPVPSSKPNT KTSLPSTPIA KEGQKHYNAK ANLNLNIKQF VKKEESVYQY LSWLIRYLNK QARERDLYPK EAKKLGIKGE VVVRVTINKN GTIDMSSLRV VQSSGYKILD ESAPKIIYEL SPFRKPPKKI TINLPVYFLI NGYY
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