Gene HY04AAS1_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHY04AAS1_0401 
Symbol 
ID6743195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHydrogenobaculum sp. Y04AAS1 
KingdomBacteria 
Replicon accessionNC_011126 
Strand
Start bp350385 
End bp351209 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content35% 
IMG OID642750194 
ProductTonB family protein 
Protein accessionYP_002121069 
Protein GI195952779 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.236004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCAC GTCTTAAAAG TCGCCAAAAA GAGTATTTTA TTTTAGGTAT TTTGATTTCT 
TTACTACTTC ATATTTGGCT TTTAATAGCT TTTATCCATA TGAAAACCAA AAAACCAAAG
AAAAATAAGC CAATAGAGAT AACACTAGTA CAAAAAGGTG TACCAAACAA AGCTATAGTC
CCGCCTGCTA TACCAATGCC GCCATTCCCC ACACGTAAAC CCTCAAAGCC TCATCGCGTT
TCAAAACCAT CAATAAAACC ATCAACTCGT AACCATGTTA ATAGACCCTC TACTCAAAAG
TACGAAGCGC TTCCTTCTCG TATTTTAAAC TCTTTGCCAA AAAGTAGCTA CAAACCCTAT
ATTGAATCTG AATCAAAGTC AACAGCTTCT TCACCAGTAC CATCTTCCAA ACCAAACACA
AAGACATCTT TACCTTCTAC TCCCATAGCA AAAGAAGGAC AAAAACACTA CAATGCAAAG
GCGAATCTAA ATTTAAACAT AAAACAATTT GTAAAGAAAG AAGAAAGCGT TTATCAATAT
CTTAGCTGGC TTATTAGGTA TCTTAATAAA CAGGCTAGAG AAAGAGATTT GTATCCTAAA
GAAGCTAAAA AACTTGGTAT AAAGGGTGAG GTGGTGGTAC GGGTTACTAT AAACAAAAAT
GGGACAATAG ATATGTCTTC TTTAAGAGTT GTGCAATCAA GCGGTTACAA GATTTTGGAC
GAAAGTGCAC CAAAAATTAT ATACGAACTT TCTCCTTTTA GAAAACCGCC AAAGAAGATA
ACAATTAATT TACCTGTGTA TTTCTTAATA AACGGCTATT ATTAA
 
Protein sequence
MTPRLKSRQK EYFILGILIS LLLHIWLLIA FIHMKTKKPK KNKPIEITLV QKGVPNKAIV 
PPAIPMPPFP TRKPSKPHRV SKPSIKPSTR NHVNRPSTQK YEALPSRILN SLPKSSYKPY
IESESKSTAS SPVPSSKPNT KTSLPSTPIA KEGQKHYNAK ANLNLNIKQF VKKEESVYQY
LSWLIRYLNK QARERDLYPK EAKKLGIKGE VVVRVTINKN GTIDMSSLRV VQSSGYKILD
ESAPKIIYEL SPFRKPPKKI TINLPVYFLI NGYY