Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0386 |
Symbol | |
ID | 6743180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 339912 |
End bp | 340574 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642750179 |
Product | peptidase M50 |
Protein accession | YP_002121054 |
Protein GI | 195952764 |
COG category | [R] General function prediction only |
COG ID | [COG1994] Zn-dependent proteases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0579866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACTTTG AACAAATAGT AATTACTATA CCGGCTTTAA TGATGGCTGT TATATTTCAT GAAATAGCTC ATGGGGCAGC GGCCTATTGG ATGGGAGATA AAAGCGCCAA GGAAGCCGGA AGGCTGACAA TAAACCCAAT TCCTCATATA GATTTGCTTG GCACTATCAT ATTGCCTGGG ATTTTGATGC TCGTGGGTTC TCCTATACTT TTTGGTTGGG CAAAACCAGT ACCTATAAAC CCATACAGAT TTAGAAACTT AAGAATGGGT ATGCTTATTG TATCATCAGC AGGTGCTTTA GCAAATATAG CGATGGCAAT CTTAGGTGCT GTTTCTTTTA GGCTTTTAGA AAGTACTATA GCATCTGATA TAAATCCATT TTTTTTCGCA AGCGTTGTAG AACCTCTTTT GTGGTTTTCT AGAGAGCTTG TTATAATAAA CTTAGTGTTG GCGTTTTTTA ATCTTTTGCC TATACCTCCT TTGGATGGAA GCCGTATTGT TATGAGTTTC TTTTCTGTAA AGTATTGGGA AGAGTTTTAT AAGTTTGAAC CTTACGGGTT TTTGATACTT ACCGTACTTA TTTTTACTGG TGTAATAGGT AAAATTATAT ATCCTTTTAT AGCTATTGCT TATAGAATAC TATTGGGTGG ATTCGGTATA TGA
|
Protein sequence | MNFEQIVITI PALMMAVIFH EIAHGAAAYW MGDKSAKEAG RLTINPIPHI DLLGTIILPG ILMLVGSPIL FGWAKPVPIN PYRFRNLRMG MLIVSSAGAL ANIAMAILGA VSFRLLESTI ASDINPFFFA SVVEPLLWFS RELVIINLVL AFFNLLPIPP LDGSRIVMSF FSVKYWEEFY KFEPYGFLIL TVLIFTGVIG KIIYPFIAIA YRILLGGFGI
|
| |