Gene HY04AAS1_0363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHY04AAS1_0363 
SymbolmnmA 
ID6743157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHydrogenobaculum sp. Y04AAS1 
KingdomBacteria 
Replicon accessionNC_011126 
Strand- 
Start bp318440 
End bp319468 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content34% 
IMG OID642750156 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionYP_002121031 
Protein GI195952741 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAATAG CTGTTGGTAT GAGTGGTGGC GTTGATTCAA GCGTAGCCGC ATATTTGCTA 
AAAGAACAAG GCCATGATGT GATAGGAGTT ACATTAAGGT TTTATAAAGA AGAATGCAAA 
GAAAACGCCA GAGTATGTTG CTCTCCAAAA GATGTGCAAG ATGCGAGAAT AGTATGCGAT 
ATGCTTGGTA TACCACATAT TACGCTTGAT TGGGAAAATC TATTCAAGGA AAGAGTAATA 
GATTATTTTA TAAAAAGCTA TAAAACTGGG CTCACACCAA ATCCTTGCGC CATATGCAAT 
AAAGATGTAA AAACTGCGTT TTTGGGCTTT TATTTAAAAC AAACTGCTGA TATAGATTTT 
TTAGCTACAG GGCACTACGT GATAAAAGAA GAAGGTAAAA TAAAAAGAGC CAAAGAAAAA 
GATCAATCTT ACTTTATGGC GCTTGTCCCT AAACAAAGTC TTGACTACCT TATGTTTCCA 
GTGGGTTATA TGACAAAGCA AGAAATCAGA GATATTGCAA AGAAGATAAA TCTTCCAGTG 
GCTAACAAAA TAGAATCTCA AGATGTATGT TTTTTAAAAG GTATGGATTT AGAAGATTAT 
CTGTCTCAGT TTATAGACAT GACGCAAGGC GATATAGTGC ATATAGCCAC TCAAAAAACG 
CTTGGAAAAC ATAAAGGCAT ACACAGATAT ACCATAGGTC AAAGGCACGG ATTGGGGGTG 
TCTTATCATA AACCACTTTA TGTAGTAGAA AAAGATATTG AAAAAAATAT ACTTTACGTA 
GGTGAAAAAG AATATCTTCT CAAAGATGCA ATAACATTAA AAGATTACAA CAAGTTAGAA 
GACTTTGAAA AAGATAATAT GTATATTCAA ATTAGATACA ACTCAAAACC CATCCCAATA 
AAGCATATAG AAGAAAATAA AGATAATGTA ATAATTTTTC TAAAAGAACC GGCAACGCAA 
GTAGCAAAAG GACAAGTAGG AGCTATTTAT TTTGGGGATA TACTCTTAGG AGGTGGCATC 
ATATCTTGA
 
Protein sequence
MIIAVGMSGG VDSSVAAYLL KEQGHDVIGV TLRFYKEECK ENARVCCSPK DVQDARIVCD 
MLGIPHITLD WENLFKERVI DYFIKSYKTG LTPNPCAICN KDVKTAFLGF YLKQTADIDF 
LATGHYVIKE EGKIKRAKEK DQSYFMALVP KQSLDYLMFP VGYMTKQEIR DIAKKINLPV 
ANKIESQDVC FLKGMDLEDY LSQFIDMTQG DIVHIATQKT LGKHKGIHRY TIGQRHGLGV 
SYHKPLYVVE KDIEKNILYV GEKEYLLKDA ITLKDYNKLE DFEKDNMYIQ IRYNSKPIPI 
KHIEENKDNV IIFLKEPATQ VAKGQVGAIY FGDILLGGGI IS