Gene HY04AAS1_0358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHY04AAS1_0358 
Symbol 
ID6743152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHydrogenobaculum sp. Y04AAS1 
KingdomBacteria 
Replicon accessionNC_011126 
Strand
Start bp314820 
End bp315692 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content37% 
IMG OID642750151 
Productdihydrodipicolinate synthase 
Protein accessionYP_002121026 
Protein GI195952736 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.672086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAACAG GAAGCATAAC AGCCATAGTA ACACCTTTTA AAAACGGCGA GGTAGATTAC 
GGGGCTTTTG AGAGGCTCAT TGAATTTCAA ATACAAAACG GCACAGACGG CATATTGGTA
TGCGGGACTT CTGGCGAATC ACCTACTTTA AGCTACGAAG AACACGAAGC TGTTATAGAG
TTTGCCGTTA AAAGCGCAAA AAAACGCATA CATATAATGG CTGGGACCGG TGCAAACTCC
ACTGAAGAAG CTTTGAGGTT TACTACGTTT GCAAAAGCAG TAGGAGCAGA TAGCGCTCTT
TTGGTGGTAC CTTATTACAA CAAACCAACT CAAGAAGGGC TTTATAGACA TTTTAGCAAG
ATAGCCAAAG AAGTAGATAT AGACATATAC ATATACAACA TACCTTCTCG TACAGGCATA
GAAATATCTG TAGATACCTT AGAAAGGCTT GCAAAAGACC ACAAGAATAT AAAAGGCTCA
AAAGAATCTA CACCAAACAT GGATAGAATA TCTGAGATTT TAAAAAGAAT ACCAAACTTC
ACGGTATTTT CTGGAGATGA TTCTTTGACA CTTCCTATGA TGAGTTTAGG TGCTAAAGGT
GTGGTCTCTG TTATAAGCAA CGTGATGCCA AAAGAGATAA AGGAGTTTAC CTCTTACGCT
TTAAAAGGGG ATTTTGAAAA AGCAAGAGAT ATGCATTATT ATCTTTTGGA AATATTTAAG
ATTATGTTCA TAGAGACAAA CCCAATCCCT GTAAAAACCG CACTTTCTTT GATGGGTATG
GTAAAAAAAG AGTTTAGGCT ACCTCTTTGT GAAATGCTTC CTCAAAACGA AGAAAAGTTA
AAAGAAGTCC TAAAAAAATA CAACCTTATA TGA
 
Protein sequence
MLTGSITAIV TPFKNGEVDY GAFERLIEFQ IQNGTDGILV CGTSGESPTL SYEEHEAVIE 
FAVKSAKKRI HIMAGTGANS TEEALRFTTF AKAVGADSAL LVVPYYNKPT QEGLYRHFSK
IAKEVDIDIY IYNIPSRTGI EISVDTLERL AKDHKNIKGS KESTPNMDRI SEILKRIPNF
TVFSGDDSLT LPMMSLGAKG VVSVISNVMP KEIKEFTSYA LKGDFEKARD MHYYLLEIFK
IMFIETNPIP VKTALSLMGM VKKEFRLPLC EMLPQNEEKL KEVLKKYNLI