Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0358 |
Symbol | |
ID | 6743152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 314820 |
End bp | 315692 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642750151 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_002121026 |
Protein GI | 195952736 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.672086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAACAG GAAGCATAAC AGCCATAGTA ACACCTTTTA AAAACGGCGA GGTAGATTAC GGGGCTTTTG AGAGGCTCAT TGAATTTCAA ATACAAAACG GCACAGACGG CATATTGGTA TGCGGGACTT CTGGCGAATC ACCTACTTTA AGCTACGAAG AACACGAAGC TGTTATAGAG TTTGCCGTTA AAAGCGCAAA AAAACGCATA CATATAATGG CTGGGACCGG TGCAAACTCC ACTGAAGAAG CTTTGAGGTT TACTACGTTT GCAAAAGCAG TAGGAGCAGA TAGCGCTCTT TTGGTGGTAC CTTATTACAA CAAACCAACT CAAGAAGGGC TTTATAGACA TTTTAGCAAG ATAGCCAAAG AAGTAGATAT AGACATATAC ATATACAACA TACCTTCTCG TACAGGCATA GAAATATCTG TAGATACCTT AGAAAGGCTT GCAAAAGACC ACAAGAATAT AAAAGGCTCA AAAGAATCTA CACCAAACAT GGATAGAATA TCTGAGATTT TAAAAAGAAT ACCAAACTTC ACGGTATTTT CTGGAGATGA TTCTTTGACA CTTCCTATGA TGAGTTTAGG TGCTAAAGGT GTGGTCTCTG TTATAAGCAA CGTGATGCCA AAAGAGATAA AGGAGTTTAC CTCTTACGCT TTAAAAGGGG ATTTTGAAAA AGCAAGAGAT ATGCATTATT ATCTTTTGGA AATATTTAAG ATTATGTTCA TAGAGACAAA CCCAATCCCT GTAAAAACCG CACTTTCTTT GATGGGTATG GTAAAAAAAG AGTTTAGGCT ACCTCTTTGT GAAATGCTTC CTCAAAACGA AGAAAAGTTA AAAGAAGTCC TAAAAAAATA CAACCTTATA TGA
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Protein sequence | MLTGSITAIV TPFKNGEVDY GAFERLIEFQ IQNGTDGILV CGTSGESPTL SYEEHEAVIE FAVKSAKKRI HIMAGTGANS TEEALRFTTF AKAVGADSAL LVVPYYNKPT QEGLYRHFSK IAKEVDIDIY IYNIPSRTGI EISVDTLERL AKDHKNIKGS KESTPNMDRI SEILKRIPNF TVFSGDDSLT LPMMSLGAKG VVSVISNVMP KEIKEFTSYA LKGDFEKARD MHYYLLEIFK IMFIETNPIP VKTALSLMGM VKKEFRLPLC EMLPQNEEKL KEVLKKYNLI
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