Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0353 |
Symbol | |
ID | 6743147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 311684 |
End bp | 312259 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642750146 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002121021 |
Protein GI | 195952731 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000439096 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAAAA GAACAAGAAA CAGGATATTG CACGAGGCTC TTAAAATATT TTCAAATAAA GGCATTAGAG AAACTACCAT AAAAGACATA GCAAGAGCGG TGGGCATAAC AGAAGGAGCC ATATATAGGC ATTTTGACAG CAAAGAGCAA ATAGTAAAAT CTCTTTTTCT AAATAGCTCG CAGGAGTTTT ATAACCACTT AAGTAGCGCC TTATCAAAAG CCCAAAACTT TGAAGAAGCT TTAAAAAATC TATCCGAAGC GTTTTTAAAT TATGCTTTTA CAAACCCAGA GGCTTTTAAG TTTATAAATC TATTTCATTA TTTTAAAATA GACTATGAGC TAAAGCTAAA AGATGGTAAA ATGCCAAAAG ATGTTATATA CGAATTTTTT AAAAGCCATG AAGAGATAGG CATACAACCA GAATATGCCA CAGCGCTTTT CATAGGCACG TTGGAGCGTA TATTCTTATT CTATGAGATG GGTTTTATAG ACGACATAGA AGAAGATATA CAAGAAAAAG CTTATAGGCT CCTCCTTAGC ATATTTAGAA AAACATCAAA AGAGGATTTA AGTTAA
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Protein sequence | MPKRTRNRIL HEALKIFSNK GIRETTIKDI ARAVGITEGA IYRHFDSKEQ IVKSLFLNSS QEFYNHLSSA LSKAQNFEEA LKNLSEAFLN YAFTNPEAFK FINLFHYFKI DYELKLKDGK MPKDVIYEFF KSHEEIGIQP EYATALFIGT LERIFLFYEM GFIDDIEEDI QEKAYRLLLS IFRKTSKEDL S
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