| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0313 |
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| Symbol | |
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| ID | 6743107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 273500 |
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| End bp | 274255 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642750106 |
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| Product | RNA methyltransferase, TrmH family, group 3 |
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| Protein accession | YP_002120981 |
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| Protein GI | 195952691 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000179001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAAGC ACACTATGCA AAGTTATGTA ATATGGGGAA GAAATCCAGT CATAGAAGCC
CTTGTAGCTG GTCAATCTAT GGAAAAAATA CTTATAGCGC ATGATTCAAA AGCACCAAAA
GAGCTTTTAG ACCTTGCCAA AGAAAGAGGT ATAAAAGTCC AGATTGCACC AAGGCAAAAA
CTAGAGGAGC TTGCAAACAC CAAAAAAACT CAGGGAGTTG TAGCCATACT AAGCCCTATC
ACCTATGTGC CAGAAGAAGA GCTTTTTAGA AAAACGATAG AAGAAAAAGG CTTTTTTGTA
GTGCTTGATC ATATAACAGA CCCACAAAAC GTAGGTTCTA TAGCAAGGAC TGTTGAAGTG
TTTGGAGGTA TAGGGCTTTT AATACCAAAA GATAGAAGTG CTCCTATAAA TGCCGTTGTT
GTAAAGTCTT CATCTGGTGC TATATTTCAT CTTAAAATCT CAAAAACCCC AAGTATCAGC
AAAGCTATAA AAACCTTTAA AGAGATGGGC GGATGGGTTT ACGCTCTTGA AAAAGGCGGA
AAAGATATAA CGAAAGTAGA TTTTGCATAT CCTATGTGTA TAGTGCTAGG TTCTGAAGGT
GAAGGCGTAT CAAAAAATGT ATTAGAGCAT TCGGATGTTA GAGTCTCCAT ACCCATGAAA
GGCAAAGTAA CATCTCTTAA TGTAAGTGCA GCTGGAGCTA TATGTTTATG GGAAGTTTAT
AAAAATCAAG AAAACACCGG AGCATCGAAA AAGTAA
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| Protein sequence | MLKHTMQSYV IWGRNPVIEA LVAGQSMEKI LIAHDSKAPK ELLDLAKERG IKVQIAPRQK
LEELANTKKT QGVVAILSPI TYVPEEELFR KTIEEKGFFV VLDHITDPQN VGSIARTVEV
FGGIGLLIPK DRSAPINAVV VKSSSGAIFH LKISKTPSIS KAIKTFKEMG GWVYALEKGG
KDITKVDFAY PMCIVLGSEG EGVSKNVLEH SDVRVSIPMK GKVTSLNVSA AGAICLWEVY
KNQENTGASK K
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