Gene HY04AAS1_0266 details

Gene Information

• Locus tag: HY04AAS1_0266
• Symbol: rplD
• ID: 6743060
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Hydrogenobaculum sp. Y04AAS1
• Kingdom: Bacteria
• Replicon accession: NC_011126
• Strand: +
• Start bp: 241584
• End bp: 242186
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 642750059
• Product: 50S ribosomal protein L4
• Protein accession: YP_002120934
• Protein GI: 195952644
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0000651042
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGGTGA ATGGTGTAGA ACTAAGAGAT GATGTTTTTA ATGTAGAACC TAAAAAGCAT 
ATTTTGTGGG ATGTGGTTAG ATGGCAGCTT GCTAAAAGAA GGCAAGGTAC TCATTCCACA 
AAGACTAGAG CTGAGGTAAA TTGTAGCAAG AAGAAGATAA TGCCTCAAAA AGGTACTGGT 
AACGCTAGAC ACGGTGCCAG ATCTGCAAAT ATATTTGTTG GTGGCGGTGT TGTACATGGT 
CCTACACCTA GAGATTATGA ATATAAGCTA TCTAAAAAGT ACAGAAAAAT AGCTCTTGCT 
ATGGCTCTTA GCACAAAAGC TAAGAACAAC TCTGTTTATG TATTAGAATC TTTGTTATCT 
TCTTTAGGAA AGCCCAAAAC TAAGGTGGCT TTTGAGCTTT TAAAAGAAAA AGGTATATCT 
GACAAGAAAG TTTTGGTAGT GACAAAAGAT CAAAACGATA TTGTTTCTAA AAGCTTTAAA 
AATATACCAA ATACAAAAGT ATTACCCGTT GTAGGTCTTA ATGTTTACGA TATTCTTTGG 
GCTGATGCTT TGTTGATAGA GCAAGGAGCC TTGGAAAAAA TTTATGAGAG GGTAAATTTA 
TGA 

 

Protein sequence

MLVNGVELRD DVFNVEPKKH ILWDVVRWQL AKRRQGTHST KTRAEVNCSK KKIMPQKGTG 
NARHGARSAN IFVGGGVVHG PTPRDYEYKL SKKYRKIALA MALSTKAKNN SVYVLESLLS 
SLGKPKTKVA FELLKEKGIS DKKVLVVTKD QNDIVSKSFK NIPNTKVLPV VGLNVYDILW 
ADALLIEQGA LEKIYERVNL