| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0263 |
|---|
| Symbol | |
|---|
| ID | 6743057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | + |
|---|
| Start bp | 239337 |
|---|
| End bp | 240554 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 642750056 |
|---|
| Product | elongation factor Tu |
|---|
| Protein accession | YP_002120931 |
|---|
| Protein GI | 195952641 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0050] GTPases - translation elongation factors |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000000516793 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGG AAAAGTTTGT TAGAGAGAAA GAGCACATCA ACGTAGGTAC CATAGGTCAC
GTTGACCATG GTAAATCTAC CTTAACATCT GCTATCACCT GTGTGTTAGG TGCTGGTGTA
TTATCAGGCG GTAAGGCAAA ATGCTACCGT TATGAAGAAA TAGACAAAGC ACCTGAAGAA
AAAGAAAGAG GTATTACCAT CAACATAACT CACGTTGAAT ACGAAACACC AAAAAGACAC
TACGCTCACG TTGACTGTCC CGGACACGCA GACTACATAA AGAACATGAT TACAGGTGCC
GCTCAAATGG ACGGTGCAAT ACTTGTTGTA TCAGCAGCAG ATGGTCCAAT GCCCCAAACC
AGAGAACACG TTTTGCTAGC AAGACAAGTT AACGTCCCTT ACATAGTGGT ATTTATGAAC
AAATGCGATA TGGTAGATGA TCCAGAGCTA TTAGATCTAG TAGAGTTAGA AGTAAGAGAC
CTACTAAACA AGTACGAATT TCCGGGTGAT GATGTGCCAA TTATAAGAGG TTCTGCTTTA
GGAGCCCTTG AAGAACTAGA CAAAGGCAAA CCAGACAAAT GGTGCAATGC AATAGTAGAC
CTTATGAAAG CCTTAGATGA CTATATACCA TCTCCTCAAA GAGAAACTGA TAAGCCATTC
CTAATGCCAA TAGAAGATGT CTTTACCATA TCTGGTAGAG GTACAGTTGT CACAGGTAGA
GTAGAAAGAG GTGTGCTAAA ACCAGGCGAA GAAGTGGAAA TAGTAGGTCT AAAAGAAGAA
TCCCTAAAAA CTACAGCCAC ATCTGTGGAA ATGTTTAGAA AAATCCTTGA CGAAGCATTA
CCCGGTGACA ACGTAGGTGT GTTATTAAGA GGTGTAGGTA AAGACCAAGT AGAAAGAGGT
CAAGTCTTAG CAAAGCCAGG TTCTATAACT CCACATAAAA AGTTCAAAGC TCAAGTTTAC
GTATTGTCAA AAGAAGAAGG TGGTAGACAC ACTCCATTCT TCCTAAACTA CAGACCTCAG
TTCTACATAA GAACCGCTGA CGTAACAGGT ACAGTGGTAA AGCTTCCAGA AGGTCAAGAG
ATGGTAATGC CTGGTGATAA CGTAGAGTTT GAAGTAGAGC TAATACATCC AGTAGCTATG
GAAGAAGGCC TTAGATTTGC CATAAGAGAA GGTGGTAGAA CAGTTGGTGC TGGTGTTGTC
ACCAAGATTA TAGAGTGA
|
|---|
| Protein sequence | MAKEKFVREK EHINVGTIGH VDHGKSTLTS AITCVLGAGV LSGGKAKCYR YEEIDKAPEE
KERGITINIT HVEYETPKRH YAHVDCPGHA DYIKNMITGA AQMDGAILVV SAADGPMPQT
REHVLLARQV NVPYIVVFMN KCDMVDDPEL LDLVELEVRD LLNKYEFPGD DVPIIRGSAL
GALEELDKGK PDKWCNAIVD LMKALDDYIP SPQRETDKPF LMPIEDVFTI SGRGTVVTGR
VERGVLKPGE EVEIVGLKEE SLKTTATSVE MFRKILDEAL PGDNVGVLLR GVGKDQVERG
QVLAKPGSIT PHKKFKAQVY VLSKEEGGRH TPFFLNYRPQ FYIRTADVTG TVVKLPEGQE
MVMPGDNVEF EVELIHPVAM EEGLRFAIRE GGRTVGAGVV TKIIE
|
|---|
| |