| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0255 |
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| Symbol | rplA |
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| ID | 6743049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 225378 |
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| End bp | 226103 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 642750048 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_002120923 |
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| Protein GI | 195952633 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000000222102 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAAGAG GAAAGAAGTA TATAGAGGCT TCTAAGCTTG TAATGCCAGG TAAAACTTAT
GCTTTGCCTG AAGCGGTAGA GATTCTTAAA AAAATGGAAG ACATCTTAAA GCATAAGTTT
GATGAAACTG TTGAACTTGC TATGAAGTTG GGTGTAGATC CTAAGTATGC CGACCAAATG
GTTAGAGGGT CTTTAGTGTT ACCGGCCGGG CTTGGAAGAG AGCTAAAGGT GTTGGTTTTG
GCTGAAGGTG ATGCTATAAA AGAAGCCCAA AACGCTGGGG CCGATTATGC TGGTGGCGAT
GATATAATAA ATAAAATCCT TAAAGAGTCT TGGGTAGATT TTGATGTAGT GATAGCTACA
CCAGAGATAA TGCCAAAGGT TGGTAAGCTT GGTAAAGTGC TTGGACCAAG AGGCCTAATG
CCAAACCCAA AAACCGGTAC CGTGACACCT AACGTAAAAG CAGCTGTAGA AGAAGCTAAA
AAGGGTAGAG TAGAGTTCAA AGTAGATAAA ACCGGTAATA TTCATATGCC TATAGGTAAA
ATAAGCTTTA AACCAGAAGA TATTATGAAA AATGCTTATG CGGCTATAGA TGCTGTGGTA
AGAGCAAAGC CTCCAGGTGC CAAGGGCCAA TATGTGAAGA ATATAGCTAT ATCTTTAACG
ATGAGCCCTT CTGTTGAACT TGATATACAA ACAACGCTAA AACAATTGCA AGAAGCTGTA
GCTTAA
|
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| Protein sequence | MRRGKKYIEA SKLVMPGKTY ALPEAVEILK KMEDILKHKF DETVELAMKL GVDPKYADQM
VRGSLVLPAG LGRELKVLVL AEGDAIKEAQ NAGADYAGGD DIINKILKES WVDFDVVIAT
PEIMPKVGKL GKVLGPRGLM PNPKTGTVTP NVKAAVEEAK KGRVEFKVDK TGNIHMPIGK
ISFKPEDIMK NAYAAIDAVV RAKPPGAKGQ YVKNIAISLT MSPSVELDIQ TTLKQLQEAV
A
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