| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0246 |
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| Symbol | |
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| ID | 6743036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 219379 |
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| End bp | 221061 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642750037 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002120916 |
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| Protein GI | 195952626 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00126346 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGATA CAGAAAGGAA TTTAAGGTTT TTAAGATTTT TGCGAAACGA AGGACTCATA
GATGACAATA CATTAAAAGA ATTAAAAGAT CTAGATATAG ACATAGTAAG CTATCTTGTA
GAAACTAAAA AAATAACTGA GCAAGATCTT CTTAACGCAT ATTCAAAAAT GTTTAAATTT
GTAGATAGAT ACGGTAGCAT AGTAAACATA GATAAAATAG ATAAAAATCT TTTAAACTTA
TTTCCTCAAG ATTTTATAGT AAAAAATAAA ATAATACCCA TTTCTATGTC TGACAATAAT
ATTATTGTAG CTACATATAT GCCGTACATA GATGAAAATC AAATAAAGTA CATTACCAAA
AAAACAAATG TAATAATCTG GTACGCGGCA CCGTCACACA TAAAAAGTGT AATAGATAAT
ATCTTTCATA GTTCTGGATC TATAGACTTA AGCACAGAAG AGGTATATAT AGAAGTAAAC
CAAGAATACG ATATCAATAT AGAAAAGTTG GTAGAACAAT CAAGCGAAAG TGCAATCGTG
AAATTGGCTG ACTCCATACT TTATAGAGCT GTAAAAGATG GTGCTTCTGA TATACATATA
GAGCCTCAGG AAAAAGAAAT TGTTCTAAGA TTTAGAATAG ATGGAATGCT GAAAAAAATA
GACACTTACC CAACAAATAT AAAAGAACCA CTAGTATCTA GGTTTAAAAT ATTGGCAAAC
CTCGATATAT CGGAAAGAAG AAAGCCTCAA GACGGGACAA TAAAAGTAAG AATATCAAAT
AAAAAAGTTC AGCTTAGAAT ATCGACACTT CCTACAATAT TCGGTGAAAA AATAGTAATG
AGAGTGCAGT TTCCTGATGA GTTTTCAGCT TTAAAATTAG AAACGCTTGG ATTTGAAGAA
GATGAAGTGG AAAAACTAAA ACAAACTTAC AGCAAACCTT ATGGGATAAT ACTAGTGGTA
GGACCCACAG GTAGCGGGAA AACTACAACC CTTTATTCAA TACTTCAAGA CTTAAACAAA
GAAGATGTAA ATATAGTAAC TGCCGAAGAC CCGGTAGAAA TAAATATACC AGGGCTTAAT
CAAGTCCAAA TAGATGAAAA AGTAGGAAGG ACTTTCGAAT CGGTTTTAAG GTCATTTTTA
AGGCAAGACC CAGATATTAT GCTTGTAGGT GAAATAAGAG ATGCTATAAC GGCTGAAATA
GCGATAAAAT CATCTCTTAC TGGGCACTTA GTCCTATCAA CGCTACATGT AAACGATGCG
CCAAGTACGG TAGCAAGGCT TATAGACATG GGGATAGAAC CGTTTCTCAT ATCATCTTCA
CTTTTGGCAG TATCCGCTCA AAGGCTTGTT AGAAAGTTGT GTCCATATTG CAAAATACCA
TATGAACCCA CAAAGGAAAA AAGAGAATAT TACGGCATTA CCACCAATAC AATATATAAA
GCAAGCAAGC AAGGCTGTGA ACATTGCAAC TATTTAGGTT ATAAAGGAAG AACTGTAATA
GCAGAACTCA TGTTTGTAGA TAATGAAATA AGAGAGGCTA TAAATCAAAA GAAAACCACA
GAAGAGATAA GAGAAATAGC TATTAAAAAA GGTATGAAGA CATTGTTTCA GTCTGGTATA
ATAAAAGTAA ACAAAGGAAT TACATCTTTA GAAGAAGTGT TAAGAGTATC TATACAAGAT
TAA
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| Protein sequence | MPDTERNLRF LRFLRNEGLI DDNTLKELKD LDIDIVSYLV ETKKITEQDL LNAYSKMFKF
VDRYGSIVNI DKIDKNLLNL FPQDFIVKNK IIPISMSDNN IIVATYMPYI DENQIKYITK
KTNVIIWYAA PSHIKSVIDN IFHSSGSIDL STEEVYIEVN QEYDINIEKL VEQSSESAIV
KLADSILYRA VKDGASDIHI EPQEKEIVLR FRIDGMLKKI DTYPTNIKEP LVSRFKILAN
LDISERRKPQ DGTIKVRISN KKVQLRISTL PTIFGEKIVM RVQFPDEFSA LKLETLGFEE
DEVEKLKQTY SKPYGIILVV GPTGSGKTTT LYSILQDLNK EDVNIVTAED PVEINIPGLN
QVQIDEKVGR TFESVLRSFL RQDPDIMLVG EIRDAITAEI AIKSSLTGHL VLSTLHVNDA
PSTVARLIDM GIEPFLISSS LLAVSAQRLV RKLCPYCKIP YEPTKEKREY YGITTNTIYK
ASKQGCEHCN YLGYKGRTVI AELMFVDNEI REAINQKKTT EEIREIAIKK GMKTLFQSGI
IKVNKGITSL EEVLRVSIQD
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