| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0241 |
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| Symbol | |
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| ID | 6743031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 214767 |
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| End bp | 216689 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642750032 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002120911 |
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| Protein GI | 195952621 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTTAT TTTATAAAAT AAAGAAGTTT ATAGTTACGT CTATAACACA TAAGCTTATA
TTTAGATTGT TTGTACTTAT AACATCAATA GTCATTATAA CGGAAGGAAT ATTTGCTGTT
TCTTTTAGAG AGCAAGGTAT TAGATACGCT TTATCAAAAG CCAATACTGT GGCTGGTATT
GTAAGAGACG GACTAACATC TTTGATGGTA ATGGGCGTTA TAAAAGATAG GGAGTCTTAT
ATTAAAAGGC TTGAGCGAGT AAAAGGTGTA ACAAACATAC ATATAGTAAG GGGAGAAGCT
GTAGATAAAC AGTTTGGTCC AGGGCTTCCG ACAGAACAAC CAATAGACAA CTTAGAAAAA
CTTGTACTTT TAACAGGAAA GCCTATTTAC AAAATATATG AAAGCCCATC AAAAGTGCTT
GTTAGAGACA TAATACCCTA TAAAGCCTCG AATAAAGGCA TAGTAAATTG CTTTCAGTGC
CACGAGGTCC AAAACGGCCA GGTATTAGGC GCAATAGATA TAACACTTGA TGTAACAGGC
ATAAGATATA AAGCATTTTT AGTAATGTTA ACTACGCTGT TAATTTTTGT TGGGCTTTTT
GGTGCGTTAT CTTACTCTAT ATTTAGATTC TCAAAACCAT ATATAGATAT GTTTAATAAG
CTTATAAAGA GCTTCGACTC ACTGCAAGAA GGAAGATTCG AAGAAGCTAA GATAAGAGAT
AGCAGCGTAT TAGAAAACAA CGAAATAATA GATGAGGCTG GTAAGGTGGT GATATTTTTC
AATAAGATGA TCGATATACT GCATAACGCT TTAAACAGTA TACATCAAAA AGCTTTCACT
CTAATAGGAT ACGATGTTAT GAATTCTGGC AACACCATAA AAGATACCGA TAAAATAGTA
ACAGAACTAG AAAATATATA TAAATTCAAA AAAACCATAG AAAAAGATAG CTCTAAAGAA
GATATATACG AAAGACTACG ATTAATACTA GAACACTACA TGTCTTTGGA TAAGTTTAGC
TTATATGAAG TGCATTACGA TAAAATGAAG CTAATATTTG CAAATGGCAC CGACAAACTC
TGGTGCAAGG AAGAAATCTT AAAGGACAAC AACTGTTGCA GAGCCTATAG GACTGGTGCA
GACGTAAACA GCGATGAATT TCCAAACGTA TGCAAGTGTT TTATAAAGGA CTATAATGAA
TTTCAAAAAC AAGAAGATTC TTTGGAATAT TACTGCATCC CGATATATCT AAACGGACAC
GTGCACAACG TATTGCAAAT TGTATATGAA CACTACATGA AAGATTTTGT AAATATGATG
ATACCTTATA TAAAAGGCTA TCTAGATGAA GCTATACCTG TTATGGAGTC TAAGCTTTTA
ATGGAGAAAC TAAAAGAGCA ATCTATAAAA GATCAATTAA CAGGATTCTA CAATAGAAGA
TATATAGAAG AAGCCATAGA CCCTATATTA AATAACGCCA AAAGAAAAGG TGAAACCACG
GGTGTTTTGA TGATAGATGT GGATCACTTC AAAGAGATAA ATGACAAATA TGGACACGAT
GTAGGAGATA TGGTGTTAAA AACAGTAGCT CAAACTATAA AAGAATCCAT AAGAGAATCG
GATATTCCTA TAAGGTTTGG TGGTGAAGAG TTTATGGTGC TTTTAACAAA CGTAAAACCC
GGAGATAGTG AAAGTGTTGC CGAGAAGATA AGGAAAAATA TGGAAAACAG AGTTATAAAA
TTACCAAACA ACACCACTAT AAAAAGGACG ATAAGTATAG GAGTATCTGA AATACCAACA
GATACTGATA AATTCTGGCA GGCTGTTAAG TTTGCAGATG TCGCTCTTTA TAAAGCAAAA
GAATCTGGCA GAAACAAAGT AGTTAGATAT CAAAAAGATA TGTGGCAAGA AGAAGAATAT
TAA
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| Protein sequence | MHLFYKIKKF IVTSITHKLI FRLFVLITSI VIITEGIFAV SFREQGIRYA LSKANTVAGI
VRDGLTSLMV MGVIKDRESY IKRLERVKGV TNIHIVRGEA VDKQFGPGLP TEQPIDNLEK
LVLLTGKPIY KIYESPSKVL VRDIIPYKAS NKGIVNCFQC HEVQNGQVLG AIDITLDVTG
IRYKAFLVML TTLLIFVGLF GALSYSIFRF SKPYIDMFNK LIKSFDSLQE GRFEEAKIRD
SSVLENNEII DEAGKVVIFF NKMIDILHNA LNSIHQKAFT LIGYDVMNSG NTIKDTDKIV
TELENIYKFK KTIEKDSSKE DIYERLRLIL EHYMSLDKFS LYEVHYDKMK LIFANGTDKL
WCKEEILKDN NCCRAYRTGA DVNSDEFPNV CKCFIKDYNE FQKQEDSLEY YCIPIYLNGH
VHNVLQIVYE HYMKDFVNMM IPYIKGYLDE AIPVMESKLL MEKLKEQSIK DQLTGFYNRR
YIEEAIDPIL NNAKRKGETT GVLMIDVDHF KEINDKYGHD VGDMVLKTVA QTIKESIRES
DIPIRFGGEE FMVLLTNVKP GDSESVAEKI RKNMENRVIK LPNNTTIKRT ISIGVSEIPT
DTDKFWQAVK FADVALYKAK ESGRNKVVRY QKDMWQEEEY
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