Gene HY04AAS1_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHY04AAS1_0220 
Symbol 
ID6743009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHydrogenobaculum sp. Y04AAS1 
KingdomBacteria 
Replicon accessionNC_011126 
Strand- 
Start bp199850 
End bp200503 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content33% 
IMG OID642750010 
Product3-dehydroquinate dehydratase, type I 
Protein accessionYP_002120890 
Protein GI195952600 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0710] 3-dehydroquinate dehydratase 
TIGRFAM ID[TIGR01093] 3-dehydroquinate dehydratase, type I 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.26016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAG CTATACCAAT AACCGATGAA AATTTTGATG AGGTTTTATT AAAAGCCAGA 
AATGCGGATA TCTTAGAATT TAGAGTAGAT TCTTTTACAA ACAAAGATAT AAGCTTTGTA 
TCTGGGCTTT TAAAAAAAGC AAAAGAAAAT GGTTTTGAAA CGATACTTAC TATAAGAAGT 
GAAAAAGAAG GTGGGGCTTA TGTAGAAAAC AGAGTAGAAA TGTTTGAAAA ACTTATGCCT 
TTATCTGATT ATACAGATAT AGAGCTTTCT TCCACAGATA TAATAGCCTA TATATCAAGA 
CTCTCTAAAG AGTACAACAA AAAGCTTATC GTCTCTTATC ACAACTTTGA AATGACACCG 
GCAAACTTTG TTATAAAAGA AACCATAAGA GAAGCCTTAA GATATGGAGA TATTCCAAAA 
ATCGCCCTAA AAGCAAACTC CTATGAAGAT GTGGCAAGGC TTATGTGTAG TGCTATCGAT 
ATAAAAACAC CAAAAATACT CATATCTATG GGAGAGTTTG GCAAAATCTC AAGAATAGCT 
GGATTTATCT TCGGTTCTTT CATAAGCTAC GCATACTTGG AAAAACCAAA CGCCCCTGGA 
CAGCTTTCTT TAGAAGAGAT GCTTAAGCTA AAAGAAATGT TTTATTTAAG ATAA
 
Protein sequence
MKIAIPITDE NFDEVLLKAR NADILEFRVD SFTNKDISFV SGLLKKAKEN GFETILTIRS 
EKEGGAYVEN RVEMFEKLMP LSDYTDIELS STDIIAYISR LSKEYNKKLI VSYHNFEMTP 
ANFVIKETIR EALRYGDIPK IALKANSYED VARLMCSAID IKTPKILISM GEFGKISRIA 
GFIFGSFISY AYLEKPNAPG QLSLEEMLKL KEMFYLR