| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0172 |
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| Symbol | |
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| ID | 6742961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 154537 |
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| End bp | 156039 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642749962 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_002120842 |
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| Protein GI | 195952552 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTACA AAGAAATATT AAATAATTTA AAAGAGCGTT TCCAAGCTTT AAACAAAACT
CAGCAAATTA TAGTTTTGTC TATACCTGTA GTTTTAGCGC TTTTAACTGG ATTAATATTT
TTTTTGACAT CAAGAGTACA TTATGCGGTC TTGTATGGAG ATTTAAACAA CAGAGACATG
GCTGCCATAG CGGAGCAGCT TGAAAAAGAC AACGTAAAAT ATAAAATAAC TCAAGACGGT
AGGACAATTT TAGTCCCAAA GCAAGAAGCC AGACAGCTTA GATTAAAACT TGCTGCTATG
GGGCTTCCGA CAAAAGGCTA TCCAGGTTTT AAGCTTTTAA ACAAAATGCC TCTTGGAATG
ACAGATTTCA TGCAACATGT AGAATATCAA AGAGCCCTAG AAGAAGAGCT GTCAAATACG
ATATTAGGTT TTAGAAATAT AGAAAAAGCA AAGGTAAATT TAGCTATACC AAAACCAAGC
ATATTTATAA CCCAAAGCCA AAAACCCTCA GCTTCGGTAT TTATAGAATT AAAACCGGGG
GCTTCAATCA CAAGACGTCA GGTGATAGCT ATAAGGAATT TGGTGGCCGC TAGTGTGCCC
GATTTAACTC CCAACAGGGT GACTGTGGTT GATAGCAACG GCGTGGACCT AACGGAAGAA
CTAAACAACC CCTCTTCCTA TCTTACAAAT GAACAGTTAA GGGTAAAAAC AGATTTAGAA
AACTCCATAA CAAAACATCT TGAACAAGTG TTGGGTCAGG CTCTTGGTTA CAACAACGTT
AGGGTTGCTG TGGATGTAGA ACCAGATTTT TCTCAAGTGG AAACAAAATC AAAAAATTAC
AATCCGAACA CTACAGCAAT AGTTAGTCAA CAGAAAAAAC AAGAAACCAC CACAGGTACC
AGCGTATCCG GAGTACCAGG TACAGCTTCA AACATACCAC CAATGAGTGG ACTTAGACCA
AACGCCAATT TTCAATCTAC GAAAAAAGAA GTTACTACAA ACTACGATGT TAGTGTAGAA
AAAACTCATG TTGTAGATAA GACCATACGT ATAAAGAGAA TGAGTGTAGG CGTCATAGTA
AACGCTGATC TTAAAAACGT GAATCTAAAC AGTATAAGAC AATTGGTAAT TGCGGCGGCT
GGGGTAGATC CAAAAAGAGG TGATACCGTA TCTGTCATAG CGGTACCTTT TTATAGACCA
GTTGTACCGA AACCCCCTAT ATATGTTGTT TATGCAAAGT ACGGTATAGC TGGTATCTTA
CTTCTTTTGT TGCTTGGAAT ATTGCTTTTT GTATTCTTAA AAACCAGAAA AAAACCAGAA
GTTCGAGAAT TACCAGCTGT AAGTGCAGCT ATGGAAGCTT TAGAATCGCT TGAAACTGAA
GAGCTAAGAG AAAAAGCCAA GGAGCTTATT ACCGTTGATA AGATGATAAA GGTAACTAAG
GAAAATCCAG ATAAGGTGGC AAAGATTATT AAGCATTGGC TTAGTAGCAC CAAAAAGACT
TAG
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| Protein sequence | MDYKEILNNL KERFQALNKT QQIIVLSIPV VLALLTGLIF FLTSRVHYAV LYGDLNNRDM
AAIAEQLEKD NVKYKITQDG RTILVPKQEA RQLRLKLAAM GLPTKGYPGF KLLNKMPLGM
TDFMQHVEYQ RALEEELSNT ILGFRNIEKA KVNLAIPKPS IFITQSQKPS ASVFIELKPG
ASITRRQVIA IRNLVAASVP DLTPNRVTVV DSNGVDLTEE LNNPSSYLTN EQLRVKTDLE
NSITKHLEQV LGQALGYNNV RVAVDVEPDF SQVETKSKNY NPNTTAIVSQ QKKQETTTGT
SVSGVPGTAS NIPPMSGLRP NANFQSTKKE VTTNYDVSVE KTHVVDKTIR IKRMSVGVIV
NADLKNVNLN SIRQLVIAAA GVDPKRGDTV SVIAVPFYRP VVPKPPIYVV YAKYGIAGIL
LLLLLGILLF VFLKTRKKPE VRELPAVSAA MEALESLETE ELREKAKELI TVDKMIKVTK
ENPDKVAKII KHWLSSTKKT
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