| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0143 |
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| Symbol | |
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| ID | 6742930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 127391 |
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| End bp | 129502 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642749931 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_002120813 |
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| Protein GI | 195952523 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000102458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGTAA AAGCTGAAAT TGGAAATCAA GACCCTATAT ATATAGAAGC AAACAAGTAT
GCCCATCAAG CTGATAGCAG CATTCTTATA TCTCAAGGTG GTACAAAGGT ATTGGTTACT
GTATGTGTAT CAGAAGAGCC TCTATGTGGC ATAGATTTTG CACCTTTATC AGTAGATTAC
AGAGAGCGCT CTTTTGCTTG GGGTAAAATA CCAGGAGGGT TTATAAAAAG AGAGGGAAAA
CCTACAGATA GAGAAGTGCT TATCTCAAGG GTGATAGATA GACCTCTTAG ACCTCTCATG
CCCAAAGGAT TTTTAAATGA GGTGGTGGTT ACTTGTCTAA CGCTTTCAGC CGATGACAAA
TACGATCCTG ACGTGTTAGC CATCACAGGT GCTTCTGCTG CGCTCGTTTC TTCCTCTGTG
CCTTTTGAAG GGCCTATAGC TGGCATGAGG GTTTGCAGAG TAAACGGAGA ATTTATAATA
AACCCCACCT ATGAACAGCG CAAAAACAGC GATATGGATA TCGTTATGGC TCTTTCAAAA
GATGCGATAG TGATGGTGGA AGGCGGGGCA AAAGAAGTAG AAGAAAGTGT TCTTTTGGAT
GCTTTATTTT TTGGACTTGA AAAAGGACAA ACCCTTATAA AGGCCCAAGA AGAGCTTGTG
GATTCTTTAA AACCAGAGAA AAAACCCATA GGTCACATCG GTTTATCAGA TGATATGGCG
AATAAGCTAA AAGAAATTGC TTCTTCAAAG ATTTTAGAAG CTTTTAGTAT AGAAGATAAA
AAAGAAAGAT CTAAAGCTTT AAAAGATGTT TATGCTCAAG CAATGCAAAA ATTGGGGATA
TCAAAAGAAC AAGAGTTTGA CTTTTTAGTA TCTTTTAAAG ATTTAGAAAG CCAACTTATG
AGGGAGCAAA TCCTAAAATA TAAAAAGCGC ATAGATGGTA GAAAGGAAAC AGATATAAGG
CCAATTACCA TAGAAATGCA TCCACTCGAA AGACCACATG GGTCTGCTGT TTTCACTAGA
GGTCAAACTC AAGCTTTAGC TACAGTGACT TTGGCACCAA AAGATGAAGC TCAGCTTGTG
GAAACAATAT TTGAAGGTGA GACTTTTAAA AGATTTATGC TTCATTACAA CTTCCCACCT
TTTAGCACAG GTGAAGCGAG GCCTTGGGGT CCTCCAAGAA GAAGGGAGAT AGGCCACGGT
GCTTTGGCGG AAAGAGCTTT AGAGCCTCTT TTAGCGAAAG AAGAGGATTT CCCTTACATT
ATAAGAGTAG TTTCAGATAT TTTAGAATCA AACGGCTCAA GCTCTATGGC TACAGTGTGC
GCAGGTTCTT TGGCACTTTT TGATGCTGGT GTACCCATGA AAAAGCATGT AGCCGGCATA
GCTATGGGTC TTATAAAAGA TGGCGATAAC TTTGTCATAC TTACCGATAT ACTTGGAGAT
GAAGACCATC TTGGAGATAT GGATTTCAAG GTAGCTGGTA CAAGGGATGG AGTAACAAGC
GTTCAAATGG ATATAAAAAT AAAAGGTCTT AGCAAAGATA TAATGATAAA AGCTTTAAAC
CAAGCCAAAG AAGCAAGGAT GTTTATATTG GATAAACTTT ATGAAGCTAT ACCAGAACCA
AACAAAGAAG TATCTAAATA TGCTCCAAAA GCTCAAGTGA TGAAAATTCC AGAGGACAAA
GTGGGTCTTG TAATAGGCCC TGCTGGAAAG AATATAAAGT ATATAAAAGA GCAATTTGGT
GCAAGTGTAT GGATAGATGG TGCTAACGCT TATATAAATG CACCTACTAT AGAAGCCGTA
AATAAGGCGG CAGATTTTAT AAACTCTTTA ATTCAAGAGG TAGAGGTAGG TGGCGTATAT
GAAGGCAAAG TAATAAGGGT AGAAAACTAT GGTTTGTTTG TAGAAGTACT ACCTGGCAAA
GTAGGATTGC TACATGCGTC TGCTATGACT GAAAAGCCTA CTATAAACGT TGGTGATACT
ATAAAAGTAA AAGTTATGGC TATAGACGAA CAAAATAGGT TAAACCTCTG TAGTCCAGAC
TATCAAAAGC CAGAAAACCA AGAAAGACCA CGAAAAGAAC AACTTAATAG GAAACCCCAT
CACAGAAAAT AG
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| Protein sequence | MIVKAEIGNQ DPIYIEANKY AHQADSSILI SQGGTKVLVT VCVSEEPLCG IDFAPLSVDY
RERSFAWGKI PGGFIKREGK PTDREVLISR VIDRPLRPLM PKGFLNEVVV TCLTLSADDK
YDPDVLAITG ASAALVSSSV PFEGPIAGMR VCRVNGEFII NPTYEQRKNS DMDIVMALSK
DAIVMVEGGA KEVEESVLLD ALFFGLEKGQ TLIKAQEELV DSLKPEKKPI GHIGLSDDMA
NKLKEIASSK ILEAFSIEDK KERSKALKDV YAQAMQKLGI SKEQEFDFLV SFKDLESQLM
REQILKYKKR IDGRKETDIR PITIEMHPLE RPHGSAVFTR GQTQALATVT LAPKDEAQLV
ETIFEGETFK RFMLHYNFPP FSTGEARPWG PPRRREIGHG ALAERALEPL LAKEEDFPYI
IRVVSDILES NGSSSMATVC AGSLALFDAG VPMKKHVAGI AMGLIKDGDN FVILTDILGD
EDHLGDMDFK VAGTRDGVTS VQMDIKIKGL SKDIMIKALN QAKEARMFIL DKLYEAIPEP
NKEVSKYAPK AQVMKIPEDK VGLVIGPAGK NIKYIKEQFG ASVWIDGANA YINAPTIEAV
NKAADFINSL IQEVEVGGVY EGKVIRVENY GLFVEVLPGK VGLLHASAMT EKPTINVGDT
IKVKVMAIDE QNRLNLCSPD YQKPENQERP RKEQLNRKPH HRK
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