Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0127 |
Symbol | |
ID | 6742913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 113775 |
End bp | 114533 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642749914 |
Product | protein of unknown function DUF81 |
Protein accession | YP_002120797 |
Protein GI | 195952507 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000037107 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATACAA TAGATATGAT AAATTTACTA AACCCACATT TTTGGGACTA TTTTTTGTAC GGTGCTTTTG TGGTAGCCTC GGCTTTTTAC ATAAGAGCCA CAATAGGTTT TGGCTCTGGG CTTATTTCAG TATCGCTTCT AAGTCTTTTG TTTCCCATAA AGGAAGTGGT ACCAGTGGTG CTCATTTTAG ACTTGGCTGG GTCTATACTG TTAGGAGCTT ACGATTTTAC ACACATAAGG TTTAAAGAAT TAACATGGCT TTTTCCAGGT AGCATCATAG GGCTTATCAT AGGTACATTT ATTTTGGCAA ACACAGACGC TCAAAACATA ACAAGATTTT TAGGGGTATT TATCATATCC TATGTGATAT ATGCCGTTAG TTTTAAACCG GAGAAGTTAC CAATTATAAG AAAATTCTGG GCATTTCCAC TGGGGATACT TGCTGGTATT ATAGGAAGCT TATACGGCGG TGGTGGTCCT CCCTTGGTAG CTTACCTTCA GCTAAGAAGA ATAGAAAAAA GAAGCTTTAG GGCAACGTTT CAAGTGATAG CACTTTTAGA TAACATCCTT AGGGTTTTCA CCTATCTTAG TGTAGGCCTT TTAAACTTAA AACTATTTGA GATAAGCCTA TCTCTTATAC CTTTTGCTGG TTTAGGGCTT TTTGGAGGAA ACAAACTACA TATGAAAATA TCAAATGAAA CATTTATGAG ACTAACACTC TTATTTTTAT TTTTAATAGG AATAAAATAT TTAATATAA
|
Protein sequence | MHTIDMINLL NPHFWDYFLY GAFVVASAFY IRATIGFGSG LISVSLLSLL FPIKEVVPVV LILDLAGSIL LGAYDFTHIR FKELTWLFPG SIIGLIIGTF ILANTDAQNI TRFLGVFIIS YVIYAVSFKP EKLPIIRKFW AFPLGILAGI IGSLYGGGGP PLVAYLQLRR IEKRSFRATF QVIALLDNIL RVFTYLSVGL LNLKLFEISL SLIPFAGLGL FGGNKLHMKI SNETFMRLTL LFLFLIGIKY LI
|
| |