Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0123 |
Symbol | |
ID | 6742909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | + |
Start bp | 111058 |
End bp | 111939 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642749910 |
Product | protein-export membrane protein SecF |
Protein accession | YP_002120793 |
Protein GI | 195952503 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.504249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGATTA AATATATACA TTTTATAAAG TATAGATACT ATTCTTATGT GATATCTATA ATATTGATAT TGCTTTCAGC TTTTAGCTTG TATACGAGAG GCTTAAACCT TGGCCTTGAT TTTACCGGTG GGACAATGCT AGAAGTAAGG TTCCAAACAC CTGTAAGCGT AAAGCAAGTA GATGATGCTC TTTATAAGGT AGATATCAAA GATGCAGTTG TTCAGCGTAC AAACACTGGC GATATTATTG TGAAGATAAG GGTAGGTGAG AAGCCAAGCC TTGTAGAAAA AGCGTTAAAT AGCATTGGTA GTTTTCAGCT TTTACAAAGA GAAGATATCG GTTCTGTGGT AAGTGGAGAA CTAAGGAAAA AGGCTGTATG GGCTGTAATT ACTGCTTTAG TAGGCATACT GATATATCTA TCCTTTAGAT ATGAGTTTTT GTTTGCTCTT GGTGGAATAT TGGCGCTTGC TCACGACGTT TTTATAGTTG TGGGTGCTTA TTCTTGGACT TATAAAGAAG TGAGTTTGGA CGTTTTGGCT TCAATTCTTG TGGTGGCTGG CTATTCTATA ACAGATACCG TGGTAGTATT TGATAGAATA AGAGAAAATC TCAAATTAAG AAAAGGTATG GACCTGTCTG AGATTATAAA CTTGTCTGTT AACCAAAATA TAGTAAGGAC CATAATGACA TCTTCTACTG TGTTCTTATC TTCTTTAGGT CTATACCTTT TTGGTGGAAG CGTTTTATCC GATATTTCTT TTGCGTTTTT AATAGGCGTT GTGGTGGGTA CCCTTTCTTC TATATTTGTG GCTTCAGCTC TTGTGCTTGA TATAAAAATT TTACTTAGAA AGATCAAAAA ACAAAAACCA CAATCAATAT AG
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Protein sequence | MRIKYIHFIK YRYYSYVISI ILILLSAFSL YTRGLNLGLD FTGGTMLEVR FQTPVSVKQV DDALYKVDIK DAVVQRTNTG DIIVKIRVGE KPSLVEKALN SIGSFQLLQR EDIGSVVSGE LRKKAVWAVI TALVGILIYL SFRYEFLFAL GGILALAHDV FIVVGAYSWT YKEVSLDVLA SILVVAGYSI TDTVVVFDRI RENLKLRKGM DLSEIINLSV NQNIVRTIMT SSTVFLSSLG LYLFGGSVLS DISFAFLIGV VVGTLSSIFV ASALVLDIKI LLRKIKKQKP QSI
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