| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0108 |
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| Symbol | |
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| ID | 6742893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 100611 |
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| End bp | 101108 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642749894 |
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| Product | pilin |
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| Protein accession | YP_002120778 |
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| Protein GI | 195952488 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000000812987 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGTG TCAAAAAATT AAGCAAAGCT TTTTCTATAG TTGAGCTTCT TGTGGTGATA
GCCATACTTG CCATCTTGAC ATATATATTT GTGGGACCTA GTATGAGGTG GTATCATCAA
TACAAACTCT ATTCTGAAGG TCAGAGGCTA CATTCTCTTG TTATGGAAGC AAAAACCTAT
GCAATATCAA ACTCGGTTTA TGTTTCTTTG TGCAACAGCA CTGGTTCTTC TTTAACTATT
TATAATTTGG GACTTTATCC AAACTCCTCT TGTGGCGGTA ATATTGTAGA GTCTTATACT
TTACCCTCTT ACGAGGCTTC TTATCTTAGC TATACAGGAA ATCCGGGTTA TATATCCTTT
GATTCAAGGG GTGTGAGCGC TCAAAATGGA AATGTATGTG TTTATGATTC TTATATAAAC
CAGTACTATA TGATATGTGT TTCTTATGTC GGCATAAGAG ATACATCTGG CACTGGCATA
TGCCCAACTA ACTGCTAA
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| Protein sequence | MKSVKKLSKA FSIVELLVVI AILAILTYIF VGPSMRWYHQ YKLYSEGQRL HSLVMEAKTY
AISNSVYVSL CNSTGSSLTI YNLGLYPNSS CGGNIVESYT LPSYEASYLS YTGNPGYISF
DSRGVSAQNG NVCVYDSYIN QYYMICVSYV GIRDTSGTGI CPTNC
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