Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0103 |
Symbol | |
ID | 6742886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | + |
Start bp | 96036 |
End bp | 97595 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642749887 |
Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
Protein accession | YP_002120773 |
Protein GI | 195952483 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000150576 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTTA GTATACTCGA TGAGCTTCTT GACGGGGTTT TGGTAATAGG CTTAGACTAT AAGATAGTTT ATGCCAACGA TTCTGCTAAA AAGCTTCTTG ACGTAAAAGA AAACGATTTT TGTAAAGGAC TTTTTAGTAT ATGTAATTCT TGTCCCTTAA AGCTTGTTTT GGAAGAGAGA GAAAGCGTGC AGGTTTACGA TATAAAAACC AACACAGATG TTCATGCTTG TTGGAGTATG AGCCCTCTTT TTAATGGTGA TAAATGCGAG GGGGTAGTGG AGGTCTTTAA AGATGTAAGC AACGTAGTTT CTTGTATATT AGAATCTCAA AGACAAAAAA CCTACAAAGA AACAATTTTA AACTCTATAG TAGAGGCAAT ACTTGTTTTG GATGAAAACG GTTATATAGT AGAGCACAAC AATATAGCCA AAAAAATGCT TTGTAGAACC AGCGAAGAAT CTTTGATAGG AAGGCATATA AAAGAGCTTG TGAATCTGAG TTTAGAAGAG TTTCCTCCAC AAGGAGAAAG AACAGATGTA TACATAGAAA CTCCGTGTGG TAGGCAAAAA GCATCAACGC TTGTATCCCC TATGAATCTT GGTTTTGGTT ATGTGGTATC TTTTTATGTG ATCCAGCAAG ATAATATGTC TTTTTGCGAT AAACTAGATT ACATTTTTAC CAAAAGCCCA ACATTTCAAA AAGTACTTGA TTTAGTGAAA TCTTGTTCAG AGCACAATGT AAACGTGCTT ATAGAAGGAG AAACCGGCAT AGGCAAAAGC CTTTTGGCAA AATACATACA TCTTTTGTCC CCAAGAAGAG ATGCTCCTTT TGTTAAAGTA AACTGTGCTG CTATACCAGA GAACCTCTTG GAGGCAGAGC TTTTTGGATA CGTAAAAGGA GCTTTTACAG GGGCCACAAA AGATAAACCC GGTAAAGCGG AGATAGCTGA TGGCGGAACT TTGTTTTTGG ATGAGATAGG GGATATGCCA CTGAGCTTAC AGGCAAAAAT TCTCCACCTT GTGGAAGAAA AAGAATTTGA AAGGCTTGGC TCAAACACCC CTAGAAAGAC AAATACAAGG ATTATAGCTT CCACCAACAA AGACATAAAA GAGCTTATGA GACAAGGACG TTTTAGAGAA GATCTTTATT ACAGGTTAAG TGTTGTGAAC ATATATCTAC CCCCTCTTAG AGAAAGAAAA GAAGATATAC CGCTTTTAAT AAATAATTTT ATAGAAAAAT ATTCAAAACT CTATTCAAAA AGGGTAAAAT CAATATCTGG TGATGCTATA AAAATGCTCC TTGGTTATGA TTTTCCAGGT AACATCAGAG AATTAGAGCA TATTATAGAA AAGGCTGTAA TAACATGTAG AGGTAGCATA ATAAATATCG AAGATATAAG TTTAGATTTT CAAAGCAACA ACCATAAACA GCAAGAAGAA AAAGAAAGGA TAAAGGCTGT CTTAGAAAAG GTAAATTACA ACAAGAGTTT GGCGGCAAAA ATGCTTGGTA TACACCGTAC CACTCTTTGG AGAAAGTTAA AAGAGCTTGG TATTGGCTAA
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Protein sequence | MDFSILDELL DGVLVIGLDY KIVYANDSAK KLLDVKENDF CKGLFSICNS CPLKLVLEER ESVQVYDIKT NTDVHACWSM SPLFNGDKCE GVVEVFKDVS NVVSCILESQ RQKTYKETIL NSIVEAILVL DENGYIVEHN NIAKKMLCRT SEESLIGRHI KELVNLSLEE FPPQGERTDV YIETPCGRQK ASTLVSPMNL GFGYVVSFYV IQQDNMSFCD KLDYIFTKSP TFQKVLDLVK SCSEHNVNVL IEGETGIGKS LLAKYIHLLS PRRDAPFVKV NCAAIPENLL EAELFGYVKG AFTGATKDKP GKAEIADGGT LFLDEIGDMP LSLQAKILHL VEEKEFERLG SNTPRKTNTR IIASTNKDIK ELMRQGRFRE DLYYRLSVVN IYLPPLRERK EDIPLLINNF IEKYSKLYSK RVKSISGDAI KMLLGYDFPG NIRELEHIIE KAVITCRGSI INIEDISLDF QSNNHKQQEE KERIKAVLEK VNYNKSLAAK MLGIHRTTLW RKLKELGIG
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