Gene HY04AAS1_0095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHY04AAS1_0095 
Symbol 
ID6742878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHydrogenobaculum sp. Y04AAS1 
KingdomBacteria 
Replicon accessionNC_011126 
Strand+ 
Start bp87770 
End bp88906 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content36% 
IMG OID642749879 
Product1-deoxy-D-xylulose 5-phosphate reductoisomerase 
Protein accessionYP_002120765 
Protein GI195952475 
COG category[I] Lipid transport and metabolism 
COG ID[COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 
TIGRFAM ID[TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGGC TTGGTGTACT TGGTTCTACG GGGACTATTG GGAAAAATGC CCTTGATATT 
GTTAGATCAA ACAAAGATAA GATAGAGCTT ATAGGTATAG GTGCATATCG ATCATCCAAA 
GGGCTTTTAG AAGAGGTTAA AGAGTTTAGA CCTAAGTTTG TTTTTAGTGT AGAAACCCCT 
ACAAAAGACT GGATTGATGA GGTTTCAAAA TATTCTACAT ACCTTAACGA AGAAGAGGGA 
CTTCAGGCTA TTATAGAAAA CTCCGATAGG ATTTTAAACG CTATATCTGG GACCTCTGGC 
ATAAAAGCCA CTTACAGCAT ACTAAAAGCT AAAAAAATAC TTCTTGCTTC CAACAAGGAA 
TCAATCCTTT GTATGCCAAA CCTAATAAGA GAAAATATTG AGCTAGTGAT ACCGGTAGAC 
AGCGAACACA ATGCCGCTTT TGAGCTTCTT AAAAGCCACA AAACTGTGAA AAACCTTTAT 
ATAACAGCTT CAGGTGGTCC TTTCAGAGGG TATTCCAAAG AACAGCTAAA AACTGTAAGC 
AAAGAAGAGG CTCTTAAACA CCCAAATTGG AAGATGGGTC CAAAGATAAC CATAGACTCT 
GCAACACTTA TGAACAAAGG ATTTGAACTT GTAGAAGCCA GTGTATTGTT TAATATACCA 
CTTGAACGCA TAAAGATATT GATACATCCT CAAAGTATAG TGCATGCCAT AGTTGAACTT 
GAAAACGGCT CTTTTATAGC AAATATGTCG CTTCCAGATA TGAGGCTTCC TATTCAAAAC 
GCTATTTTTT ATCCAGAGAT GGTAAATTAT ACCTTCAATA GGTTAGATTT AACATCTATT 
TCTTGTCTTA CTTTTGAAAA GCCTAAAAGG GATTTGTTTA GGGCTATCGA TGTTTGTGAA 
TGGGTAGCCT CTATGGGAAA CCCTTATGTA TCTGTGCTTT TAGGAGCTGA TGATAAAGCT 
GTAGAGCTTT TTTTAGAAGG GAAAATTGGA TTTCTTGATA TACCAGTTTT GATAGAGAGC 
GTACTTTCTT CGGTGAATTT TCATATAGAA GAGAATCTTG AAGATATTTT AAGGGCTGTG 
GAGTTTGGTA AAAACAAATT ACTAGAATTA TCAAATCATA GGCTAACTAA CTGTTAA
 
Protein sequence
MTRLGVLGST GTIGKNALDI VRSNKDKIEL IGIGAYRSSK GLLEEVKEFR PKFVFSVETP 
TKDWIDEVSK YSTYLNEEEG LQAIIENSDR ILNAISGTSG IKATYSILKA KKILLASNKE 
SILCMPNLIR ENIELVIPVD SEHNAAFELL KSHKTVKNLY ITASGGPFRG YSKEQLKTVS 
KEEALKHPNW KMGPKITIDS ATLMNKGFEL VEASVLFNIP LERIKILIHP QSIVHAIVEL 
ENGSFIANMS LPDMRLPIQN AIFYPEMVNY TFNRLDLTSI SCLTFEKPKR DLFRAIDVCE 
WVASMGNPYV SVLLGADDKA VELFLEGKIG FLDIPVLIES VLSSVNFHIE ENLEDILRAV 
EFGKNKLLEL SNHRLTNC