| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0049 |
|---|
| Symbol | |
|---|
| ID | 6742830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | - |
|---|
| Start bp | 43956 |
|---|
| End bp | 45050 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 642749832 |
|---|
| Product | hydrogenase expression/formation protein HypD |
|---|
| Protein accession | YP_002120719 |
|---|
| Protein GI | 195952429 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0409] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.185682 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATGA ACTTGAACAA TAAAGATATC GTTTTAAAAG CCAAAGACAA GCTTATAAAA
AAAGTAGAAA AACTTGGAAA ACCTATCAAG CTAATGGAGT TTTGCGGTGG ACATACCCAT
GCCATAATGA GATACGCTAT AGATAAGCTT CTTGATGGAT ATGTGGAGTT TATCCATGGG
CCTGGTTGTC CTGTATGTGT TGCTTCTATG GATAGGATAG ATTTGGCTAT AGAACTTGCC
AAGATGCCAA ATGTTATATT TACCACCTAC GGGGATCTTT TGAGAGTGCC AGGCTCTTAC
AGAAAATCGC TTTTAGACAT AAGATCAGAA GGGCACGATG TAAGAAGTCT ATACTCTTGC
CTTGATGCTA TCGATATAGC TGTAAAAAAC CAAGATAAGA ATGTAATATT TTTTGCCATA
GGCTTTGAAA CCACCACACC ACCAACGGCA GTGCTTCTTA AAAAAGCAAA AGAGATGAAG
TTAAAAAATC TTTTTGTGGT ATCAAATCAC GTGATGACTC CCCCCGCTAT TAGGTATATA
CTAAACGCCG GGATATCTCA TATAGATGGC ATTATAGGAC CTGGGCATGT TAGTGTTATA
ACCGGTATGA AAATATACAA AGAGTTTGAT ATACCTATTG TTATATCTGG TTTTGAGGCT
TTTGATATAT TAAAAGCCGT AAACATGATA TTGGATCAAT ACATAAAACA TGAGAGAAAA
GTTGAAAACG CCTACACAAG AGCTGTTACA GAAGAAGGCA ACAAAGAAGC TCAAAAGCTT
ATAGAACAAA CCCTTGATAT AAGAGATACA TTTAACTGGC GAGGGATAGG TCCTTTGCCA
AAAAGCGCTC TAAAAATAAA CAAAGATTAC GAGATGTTTG ATGCAGAAAA AACCTTTGAT
GTAAAGTTAC CACCTTCAAA AGAGCATCCT CTTTGCATAT GTCCAAAAGT CATTGTAGGA
AAAGCAAAGC CCACAGATTG CAAGCTATTT GGCAATCTTT GCACCCCAGA AAACCCTATA
GGCTCTTGTA TGGTATCCTC AGAAGGAGCT TGTGCTGCTT ATTACAAATA CCAAGAGGTA
GAACTATGTA TGTAA
|
|---|
| Protein sequence | MKMNLNNKDI VLKAKDKLIK KVEKLGKPIK LMEFCGGHTH AIMRYAIDKL LDGYVEFIHG
PGCPVCVASM DRIDLAIELA KMPNVIFTTY GDLLRVPGSY RKSLLDIRSE GHDVRSLYSC
LDAIDIAVKN QDKNVIFFAI GFETTTPPTA VLLKKAKEMK LKNLFVVSNH VMTPPAIRYI
LNAGISHIDG IIGPGHVSVI TGMKIYKEFD IPIVISGFEA FDILKAVNMI LDQYIKHERK
VENAYTRAVT EEGNKEAQKL IEQTLDIRDT FNWRGIGPLP KSALKINKDY EMFDAEKTFD
VKLPPSKEHP LCICPKVIVG KAKPTDCKLF GNLCTPENPI GSCMVSSEGA CAAYYKYQEV
ELCM
|
|---|
| |