Gene SeSA_A4845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4845 
Symbol 
ID6519284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp4703738 
End bp4704421 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content46% 
IMG OID642749776 
Productpili assembly chaperone 
Protein accessionYP_002117505 
Protein GI194733946 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3121] P pilus assembly protein, chaperone PapD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACA TAAAGAAATC CGTGTTGGTC GTATTACTGA CAAGCCATGT TGCCCATGCC 
AGCATTGTTG TTGGCGGAAC CCGACTGGTT TTCGACGGCA ATAATGATGA TTCGTCAATC
AATGTAGAGA ATAAAGACAG CAAAGCGAAT CTTGTTCAGT CATGGTTATC GGTTGCCGAT
CCCCAGGTCA CAAATAAGCA GGCGTTTATT ATCACCCCGC CTCTTTTTCG CCTTGATGCC
GGGCAAAAGA ACAGCATTCG GGTTATTCGC TCTGGCGCCC CCCTACCTGC AGATCGGGAA
TCTATGTACT GGCTCAATAT TAAGGGTATT CCTTCTATTG ATGATAATGC CTCCGCGAAC
CGCGTGGAAA TCTCCATTAA TACCCAAATA AAGCTTATAT ATCGGCCGCC AGCATTAACA
AAATCGACGC CTGATAGCCA GAGCCAACAA TTAAAATGGC AGACGGCAGG TGATGTTATT
ACCGTAAATA ACCCCACGCC CTATTATATG AACTTTGCCA GTGTGACGCT TAACAGCCAT
GAAGTGAAAT CAGCGACCTT CGTTCCGCCA AAATCATCAG CGTCATTTAA ATTGAGTTCT
ACTGCCGCCC CTCATGGCAC GGTAACGTGG CGATTAATCA GCGATTATGG GATGAGTTTA
GAGCCGCATT CCGGTTCATT CTAG
 
Protein sequence
MKHIKKSVLV VLLTSHVAHA SIVVGGTRLV FDGNNDDSSI NVENKDSKAN LVQSWLSVAD 
PQVTNKQAFI ITPPLFRLDA GQKNSIRVIR SGAPLPADRE SMYWLNIKGI PSIDDNASAN
RVEISINTQI KLIYRPPALT KSTPDSQSQQ LKWQTAGDVI TVNNPTPYYM NFASVTLNSH
EVKSATFVPP KSSASFKLSS TAAPHGTVTW RLISDYGMSL EPHSGSF