Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A4845 |
Symbol | |
ID | 6519284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 4703738 |
End bp | 4704421 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642749776 |
Product | pili assembly chaperone |
Protein accession | YP_002117505 |
Protein GI | 194733946 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACACA TAAAGAAATC CGTGTTGGTC GTATTACTGA CAAGCCATGT TGCCCATGCC AGCATTGTTG TTGGCGGAAC CCGACTGGTT TTCGACGGCA ATAATGATGA TTCGTCAATC AATGTAGAGA ATAAAGACAG CAAAGCGAAT CTTGTTCAGT CATGGTTATC GGTTGCCGAT CCCCAGGTCA CAAATAAGCA GGCGTTTATT ATCACCCCGC CTCTTTTTCG CCTTGATGCC GGGCAAAAGA ACAGCATTCG GGTTATTCGC TCTGGCGCCC CCCTACCTGC AGATCGGGAA TCTATGTACT GGCTCAATAT TAAGGGTATT CCTTCTATTG ATGATAATGC CTCCGCGAAC CGCGTGGAAA TCTCCATTAA TACCCAAATA AAGCTTATAT ATCGGCCGCC AGCATTAACA AAATCGACGC CTGATAGCCA GAGCCAACAA TTAAAATGGC AGACGGCAGG TGATGTTATT ACCGTAAATA ACCCCACGCC CTATTATATG AACTTTGCCA GTGTGACGCT TAACAGCCAT GAAGTGAAAT CAGCGACCTT CGTTCCGCCA AAATCATCAG CGTCATTTAA ATTGAGTTCT ACTGCCGCCC CTCATGGCAC GGTAACGTGG CGATTAATCA GCGATTATGG GATGAGTTTA GAGCCGCATT CCGGTTCATT CTAG
|
Protein sequence | MKHIKKSVLV VLLTSHVAHA SIVVGGTRLV FDGNNDDSSI NVENKDSKAN LVQSWLSVAD PQVTNKQAFI ITPPLFRLDA GQKNSIRVIR SGAPLPADRE SMYWLNIKGI PSIDDNASAN RVEISINTQI KLIYRPPALT KSTPDSQSQQ LKWQTAGDVI TVNNPTPYYM NFASVTLNSH EVKSATFVPP KSSASFKLSS TAAPHGTVTW RLISDYGMSL EPHSGSF
|
| |