Gene SeSA_A4842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4842 
Symbol 
ID6517254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp4699453 
End bp4700538 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content52% 
IMG OID642749773 
Productputative major fimbrial protein 
Protein accessionYP_002117502 
Protein GI194734567 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.491177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAGGT TATATCTGGC GCTTATTCTG CTGTTCGCGT ACTCCAGTTA TGGTTACGCT 
TCCTGTAAAC GTTCCGGAAA TGAAGGCGCG ATCACTATCA CCCCGCCGTC GCAGCTTGTG 
GTGGATAGCC ACGCCTATAC CGCAGGCGAG GTGTTGTGGC AATCGGGCTG GGTTTCCACC 
TCCGAAGTCA CAATGGATGG CTGTAGTCGC GATTATAAGG TCGGTTTTTT ATATGAACCC 
GGTAGCGCGC AGTCAAATGC ATCAGCGACA ATCAATGCGA ATGACGGGAA CAACACGCCG 
GTATTTAGCA CCGGGATTTC CGGCGTGGGC ATTGCGATTA AAACCCAAAC GAATGCTGGC 
CCTTACGATA ATGTCATGCC AATCGATAAT ACCTACCATA ATGGCGATGG CAATAAAACA 
CACCATGCGA TGGCTCCCGC CTACAATGTT GAACTGGTCG CCTTAGGCGG TCCGATCACC 
TCCGGTACCG CGACATTCCA AAGTCCACTG GCGCGCGTAT CTTTTCGCGA TAGCGCAACG 
GAAGACTCCG GCGGCGATAT CCTGACCCAT CTGTATTTGG GGAATACGCA ATTGATTATG 
AAAGCAATGG GATGTCGGGT AGAAACACCT GCCATCACCG TGGATTTAGG CAGCGTCAAT 
TTAGGCAGTT TCACTAATAG TCAAACCGCG GGCACAGGCG AGCAGGATAT CTTATTGACC 
TGCGAACAAG GCACCGCTAT TTCCGCATCG TTAAGCGCCC AACCTGCCAG CGGAAATAAC 
CCTGATAATT CAGTCATCCA GTTGAGCAAT GCAAGCGCGC CAACCAGCGC AACCGGCGTT 
GGCGTACAGT TGGGTATTCA GGCGCCGGAC GCTGGTTTCT TTACCGACAG TTTGCCAATC 
AATCAAAAAA TTGATCTCTT TACTCACGCT ATTACCACCA ATGCCGATGG CAGCCAGACG 
GTTAGCGGCG GAACCATGAA TATGTCGACC ACCCTGAAAA TTAGCGCGCG CTACTATAAA 
ACCGCCGCCA CGGTAACGGC CGGGCAAGCG AATGCCACGG CAACATTAAA CCTGACCTAT 
AACTAA
 
Protein sequence
MRRLYLALIL LFAYSSYGYA SCKRSGNEGA ITITPPSQLV VDSHAYTAGE VLWQSGWVST 
SEVTMDGCSR DYKVGFLYEP GSAQSNASAT INANDGNNTP VFSTGISGVG IAIKTQTNAG 
PYDNVMPIDN TYHNGDGNKT HHAMAPAYNV ELVALGGPIT SGTATFQSPL ARVSFRDSAT 
EDSGGDILTH LYLGNTQLIM KAMGCRVETP AITVDLGSVN LGSFTNSQTA GTGEQDILLT 
CEQGTAISAS LSAQPASGNN PDNSVIQLSN ASAPTSATGV GVQLGIQAPD AGFFTDSLPI 
NQKIDLFTHA ITTNADGSQT VSGGTMNMST TLKISARYYK TAATVTAGQA NATATLNLTY 
N