Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A4833 |
Symbol | |
ID | 6519638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 4690677 |
End bp | 4692614 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642749764 |
Product | lytic murein transglycosylase |
Protein accession | YP_002117493 |
Protein GI | 194734270 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATAGAG CCAAACCATT TGTCTGGCGT CTCGTCGCCG CCAGCGTATG CCTGCTGACC TTTTGTCACC TCGCGCGGGC CGACTCACTG GAAGAGCAGC GTAACCGCTA TGCGCAGATT AAGCAGGCCT GGGACAACCG CCAGATGGAT GTGGTAGAGC AGATGATGCC GGGTTTGAAA GATTATCCGC TCTACCCGTA TCTGGAATAC CGTAAGATCA CCGACGATTT GATGAACCAA CCGGCGATTG CCGTCACGCA GTTTGTGCGC GCCAATCCAA CGCTTCCGCC TGCGCGTACG CTGCAATCGC GCTTCGTCAA TGAGCTGGCG CGTCGTGAAG ACTGGCGCGG CTTGCTGGCG TTTAGCCCGG AGAAACCCGG CACCACGGAA GCGCAATGTA ACTATTACTA CGCGAAATGG AGTACCGGGC AAACGGAGGC GGCCTGGCAG GGCGCGAAAG ACCTTTGGCT GACCGGCAAA AGCCAGCCGA ATGCCTGCGA TAAACTGTTC AGCGTCTGGC GGGCCTCCGG CAAGCAAGAC CCGCTGGCGT ACCTGGAACG TATTCGGCTG GCGATGAAAG CCGGGAATAC GGGGCTGGTT ACGGTGCTGG CCGGACAGAT GCCGGCGGAA TATCAAACGA TCGCCTCAGC GATCATTACC CTGGCTAATG ACCCTAATAA CGTATTGACC TTCGCACGCA CCACCGGCGC CACCGATTTT ACCCGCCAGA TGGCGGAAGT CGCGTTTGCC AGCGTCGCCC GCCAGGACGC GGAAAATGCG CGTCTGATGA TCCCCTCGCT GGTACAGGCG CAGAAACTTA ATGAGGAACA AACGCAGGCG CTGCGCGATA TCGTTGCCTG GCGACTGATG GGCAACGATG TGACCGATGC GCAGGCGAAA TGGCGCGATG ACGCGATTAT GCGCTCGCAA TCGACGTCGC TTATCGAGCG GCGCGTGCGT ATGGCGCTGG GGATGGGCGA TCGTCGCGGT CTCAATACCT GGCTTGCCCG ACTGCCGATG GAGGCGAAAG AGAAAGACGA GTGGCGTTAC TGGCAGGCGG ATTTATTGCT GGAGCGCGGT CGTGACGCCG AAGCGAAAGA GATCCTTCAT GCTTTAATGC AGAAGCGCGG TTTTTATCCG ATGGTCGCGG CGCAGCGTTT AGGCGAAGAG TACACGCTTA AAATCGATAA AGCGCCCGCC AACGTAAACA GCGCGTTGAC GCAGGGGCCG GAGATGGCGC GTGTACGGGA GCTGATGTAC TGGAACCTGG ATAACACGGC GCGCAGCGAA TGGGCGAATC TGGTAAAAAG CCGTAGTAAA TCTGAACAGG CGCAGCTGGC GCGCTATGCG TTTAACCAGC ACTGGTGGGA TCTGAGCGTA CAGGCGACGA TCGCCGGAAA ACTGTGGGAT CATCTGGAGG AGCGTTTTCC GCTGGCGTAT AACGATCTTT TTACCCGCTA TACCCGCGGA AAAGATATCT CACAAAGCTA TGCCATGGCG ATTGCCCGCC AGGAGAGCGC CTGGAACCCG AAAGTAAAAT CGCCGGTAGG GGCCAGCGGC TTAATGCAGA TTATGCCGGG AACGGCCACC CATACGGTGA AAATGTTTTC GATTCCGGAC TACCGCGGCC CCGGCCAACT GCTGGAGCCG GAGACCAACA TCAACATTGG CACCAGCTAT TTGCAGTATG TCTATCAGCA GTTTGGTAAT AACCGTATTT TCGCCTCGGC GGCGTATAAC GCTGGGCCGG GGCGCGTGCG CACCTGGCTT GGCAATAGCG CCGGGCGTAT CGATGCCGTA GCGTTTGTCG AAAGCATTCC CTTTTCGGAA ACGCGCGGCT ACGTGAAAAA CGTTCTGGCC TATGACGCTT ACTATCGCCA CTTTATGGGG CAGAAAGAGG CCTTAATGAG CGACTCTGAG TGGCAGCGGC GGTATTAA
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Protein sequence | MDRAKPFVWR LVAASVCLLT FCHLARADSL EEQRNRYAQI KQAWDNRQMD VVEQMMPGLK DYPLYPYLEY RKITDDLMNQ PAIAVTQFVR ANPTLPPART LQSRFVNELA RREDWRGLLA FSPEKPGTTE AQCNYYYAKW STGQTEAAWQ GAKDLWLTGK SQPNACDKLF SVWRASGKQD PLAYLERIRL AMKAGNTGLV TVLAGQMPAE YQTIASAIIT LANDPNNVLT FARTTGATDF TRQMAEVAFA SVARQDAENA RLMIPSLVQA QKLNEEQTQA LRDIVAWRLM GNDVTDAQAK WRDDAIMRSQ STSLIERRVR MALGMGDRRG LNTWLARLPM EAKEKDEWRY WQADLLLERG RDAEAKEILH ALMQKRGFYP MVAAQRLGEE YTLKIDKAPA NVNSALTQGP EMARVRELMY WNLDNTARSE WANLVKSRSK SEQAQLARYA FNQHWWDLSV QATIAGKLWD HLEERFPLAY NDLFTRYTRG KDISQSYAMA IARQESAWNP KVKSPVGASG LMQIMPGTAT HTVKMFSIPD YRGPGQLLEP ETNINIGTSY LQYVYQQFGN NRIFASAAYN AGPGRVRTWL GNSAGRIDAV AFVESIPFSE TRGYVKNVLA YDAYYRHFMG QKEALMSDSE WQRRY
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