Gene SeSA_A4809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4809 
SymbolrsmC 
ID6520002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp4667550 
End bp4668578 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content57% 
IMG OID642749741 
Product16S ribosomal RNA m2G1207 methyltransferase 
Protein accessionYP_002117470 
Protein GI194736271 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2813] 16S RNA G1207 methylase RsmC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000202401 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTT TTACCCCGGC AAGTGAAGTC TTGCTGCGCC ACAGTGATGA TTTCGAACAA 
AGCCGTATTC TTTTTGCCGG AGATTTGCAG GATGACCTGC CCGCGCGCTT TGAATGCGCC
GCCAGCCGCG CGTATACGCA ACAGTTTCAC CACTGGCAGG CGTTAAGCCG CCAGATGGGC
GATAACGTCC GTTTTAGCCT GGTCGCGCAA GCCAGCGATG TCGCTGACTG CGATACGCTG
ATCTACTACT GGCCGAAAAA TAAACCCGAA GCGCAGTTCC AGTTGATGAA TATTTTGTCG
CTAATGCCGG TGGGCAGCGA TGTTTTCGTC GTGGGGGAAA ACCGCAGCGG CGTGCGTAGC
GCCGAACCGA TGCTGGCGGA CTATGCGCCG CTGAACAAAG TAGATAGCGC GCGACGTTGC
GGCCTTTACC ATGGTCGTCT GGAAAAGCAG CCGCAGTTTA GTCTTGAATC CTGGTGGGCC
GAGTACAACA TCGACGGGCT GACTATCAAA ACGTTGCCGG GCGTATTCAG CCGCGACGGA
CTGGATGTCG GTAGCCAACT GCTGCTGTCT ACGCTGACGC CGCACACCAA AGGTAAAGTG
CTGGATGTCG GCTGCGGCGC TGGCGTGCTT TCCGCCGCGC TGGCCAGCCA TTCGCCGAAA
GTGCGCCTGA CGCTGTGTGA CGTCAGCGCT CCGGCGGTGG AAGCCAGCCG CGCCACGCTT
GCCGCTAATG GCCTTGAAGG CGAGGTATTC GCCAGCAACG TCTTTTCGGA AGTCAAAGGA
CGTTTTGACA TGATCATCTC CAACCCGCCG TTCCACGACG GAATGCAAAC CAGCCTCGAT
GCGGCGCAAA CGCTCATTCG CGGCGCAGTG CGCCATCTGA ACAGCGGCGG AGAGTTACGT
ATCGTGGCGA ACGCCTTTCT GCCCTATCCT AAAATTCTGG ATGAGACTTT TGGCTTCCAT
GAAGTCATCG CGCAAACCGG GCGCTTTAAG GTTTATCGTA CCGTGATGAC CCGTCAGGCG
AAGAAATAG
 
Protein sequence
MSAFTPASEV LLRHSDDFEQ SRILFAGDLQ DDLPARFECA ASRAYTQQFH HWQALSRQMG 
DNVRFSLVAQ ASDVADCDTL IYYWPKNKPE AQFQLMNILS LMPVGSDVFV VGENRSGVRS
AEPMLADYAP LNKVDSARRC GLYHGRLEKQ PQFSLESWWA EYNIDGLTIK TLPGVFSRDG
LDVGSQLLLS TLTPHTKGKV LDVGCGAGVL SAALASHSPK VRLTLCDVSA PAVEASRATL
AANGLEGEVF ASNVFSEVKG RFDMIISNPP FHDGMQTSLD AAQTLIRGAV RHLNSGGELR
IVANAFLPYP KILDETFGFH EVIAQTGRFK VYRTVMTRQA KK